FFCP PHASE1:Hg19::chr16:65159938..65159954,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:65159938..65159954,- | |||
|coexpression_cluster_id=C2382 | |||
|description=CAGE_peak_at_chr16:65159938..65159954,- | |description=CAGE_peak_at_chr16:65159938..65159954,- | ||
|id=chr16:65159938..65159954,- | |id=chr16:65159938..65159954,- | ||
|ontology_enrichment_celltype=CL:0000057!5.10e-11!75;CL:0000077!6.12e-10!19;CL:0002620!2.20e-08!23;CL:0000708!5.70e-07!3;CL:0000055!5.85e-07!180 | |ontology_enrichment_celltype=CL:0000057!5.10e-11!75;CL:0000077!6.12e-10!19;CL:0002620!2.20e-08!23;CL:0000708!5.70e-07!3;CL:0000055!5.85e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000077;7.53e-18;19!CL:0002549;3.83e-16;2!CL:0002568;8.15e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,6.97e-18,19;CL:0002549,3.83e-16,2;CL:0002568,8.15e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.10e-08;1 | |||
|ontology_enrichment_disease=DOID:2394!7.56e-09!14;DOID:171!3.28e-07!10 | |ontology_enrichment_disease=DOID:2394!7.56e-09!14;DOID:171!3.28e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;2.41e-11;10!DOID:2394;2.74e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.29e-11,10;DOID:2394,2.58e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003210!5.70e-07!3 | |ontology_enrichment_uberon=UBERON:0003210!5.70e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.83e-16;2!UBERON:0005358;3.83e-16;2!UBERON:0001886;3.83e-16;2!UBERON:0004086;3.83e-16;2!UBERON:0005282;3.83e-16;2!UBERON:0005281;3.83e-16;2!UBERON:0001282;9.82e-09;1!UBERON:0009842;9.82e-09;1!UBERON:0003704;9.82e-09;1!UBERON:0001171;9.82e-09;1!UBERON:0001172;9.82e-09;1!UBERON:0002363;1.10e-08;1!UBERON:0002346;6.82e-08;4!UBERON:0000923;6.82e-08;4!UBERON:0010316;6.82e-08;4!UBERON:0005291;6.82e-08;4!UBERON:0005284;5.77e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,3.83e-16,2;UBERON:0005358,3.83e-16,2;UBERON:0001886,3.83e-16,2;UBERON:0004086,3.83e-16,2;UBERON:0005282,3.83e-16,2;UBERON:0005281,3.83e-16,2;UBERON:0001282,9.46e-09,1;UBERON:0009842,9.46e-09,1;UBERON:0003704,9.46e-09,1;UBERON:0001171,9.46e-09,1;UBERON:0001172,9.46e-09,1;UBERON:0002363,1.10e-08,1;UBERON:0007645,1.10e-08,1;UBERON:0007647,1.10e-08,1;UBERON:0010115,1.10e-08,1;UBERON:0005284,5.77e-07,5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,22.2495418638049,19.58998143232,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0.538168907066586,3.41691822109708,0,0.300091096084402,0,0.515281080091258,0,0,0,0.252433774244115,0.368199594569197,0.323292113637624,0.710019185033229,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,2.1798003441664,0.51336800074665,8.79047667152889,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,11.7561357053239,6.10073421020206,8.39773125929279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0.902838299183157,4.5481500811197,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0.248107807818777,0.61384789315225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.979352392114111,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,4.66567381413207,0,0,0,0,0.221158519862449,0,0,0,0,0,6.38075512743207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.68679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9131464012464,0,0,0,0,0,0,0,0,0,3.57814845749386,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.318593534327405,0,2.32894435314389,0,0.53168342911599,0,1.50257608997218,3.80805212168795,0.406870733204662,0,4.618653952827,0,0.398095888698616,0,0,0,0,0,3.85994864474866,1.82696004375648,0.906823702049089,0.231522474323834,0,0,0,8.99064603272699,0.176689145945881,1.15748422962549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41539347670307,0,2.88545300921843,0.212574920101683,1.36329340684902,2.23457967189298,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.198916222116275,1.12815492523886,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:65159938..65159954,- | |short_description=p@chr16:65159938..65159954,- | ||
}} | }} |
Latest revision as of 10:59, 25 July 2015
Short description: | p@chr16:65159938..65159954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:65159938..65159954, - |
Coexpression cluster: | C2382_large_Fibroblast_Mesothelial_Mesenchymal_mesothelioma_mesenchymal_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 6.97e-18 | 19 |
fibroblast of choroid plexus | 3.83e-16 | 2 |
mesenchymal stem cell of Wharton's jelly | 8.15e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 3.83e-16 | 2 |
ventricle of nervous system | 3.83e-16 | 2 |
choroid plexus | 3.83e-16 | 2 |
brain ventricle | 3.83e-16 | 2 |
ventricular system of brain | 3.83e-16 | 2 |
ventricular system of central nervous system | 3.83e-16 | 2 |
intralobular bile duct | 9.46e-09 | 1 |
acinus | 9.46e-09 | 1 |
intrahepatic bile duct | 9.46e-09 | 1 |
portal lobule | 9.46e-09 | 1 |
hepatic acinus | 9.46e-09 | 1 |
dura mater | 1.10e-08 | 1 |
future meninx | 1.10e-08 | 1 |
ectomeninx | 1.10e-08 | 1 |
future dura mater | 1.10e-08 | 1 |
brain vasculature | 5.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.29e-11 | 10 |
ovarian cancer | 2.58e-08 | 14 |