FFCP PHASE1:Hg19::chr16:65159938..65159954,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:65159938..65159954,- | |||
|coexpression_cluster_id=C2382 | |||
|description=CAGE_peak_at_chr16:65159938..65159954,- | |||
|id=chr16:65159938..65159954,- | |||
|ontology_enrichment_celltype=CL:0000057!5.10e-11!75;CL:0000077!6.12e-10!19;CL:0002620!2.20e-08!23;CL:0000708!5.70e-07!3;CL:0000055!5.85e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000077;7.53e-18;19!CL:0002549;3.83e-16;2!CL:0002568;8.15e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,6.97e-18,19;CL:0002549,3.83e-16,2;CL:0002568,8.15e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.10e-08;1 | |||
|ontology_enrichment_disease=DOID:2394!7.56e-09!14;DOID:171!3.28e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.41e-11;10!DOID:2394;2.74e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.29e-11,10;DOID:2394,2.58e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003210!5.70e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.83e-16;2!UBERON:0005358;3.83e-16;2!UBERON:0001886;3.83e-16;2!UBERON:0004086;3.83e-16;2!UBERON:0005282;3.83e-16;2!UBERON:0005281;3.83e-16;2!UBERON:0001282;9.82e-09;1!UBERON:0009842;9.82e-09;1!UBERON:0003704;9.82e-09;1!UBERON:0001171;9.82e-09;1!UBERON:0001172;9.82e-09;1!UBERON:0002363;1.10e-08;1!UBERON:0002346;6.82e-08;4!UBERON:0000923;6.82e-08;4!UBERON:0010316;6.82e-08;4!UBERON:0005291;6.82e-08;4!UBERON:0005284;5.77e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,3.83e-16,2;UBERON:0005358,3.83e-16,2;UBERON:0001886,3.83e-16,2;UBERON:0004086,3.83e-16,2;UBERON:0005282,3.83e-16,2;UBERON:0005281,3.83e-16,2;UBERON:0001282,9.46e-09,1;UBERON:0009842,9.46e-09,1;UBERON:0003704,9.46e-09,1;UBERON:0001171,9.46e-09,1;UBERON:0001172,9.46e-09,1;UBERON:0002363,1.10e-08,1;UBERON:0007645,1.10e-08,1;UBERON:0007647,1.10e-08,1;UBERON:0010115,1.10e-08,1;UBERON:0005284,5.77e-07,5 | |||
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| ||
|short_description=p@chr16:65159938..65159954,- | |||
}} | }} |
Latest revision as of 10:59, 25 July 2015
Short description: | p@chr16:65159938..65159954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:65159938..65159954, - |
Coexpression cluster: | C2382_large_Fibroblast_Mesothelial_Mesenchymal_mesothelioma_mesenchymal_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 6.97e-18 | 19 |
fibroblast of choroid plexus | 3.83e-16 | 2 |
mesenchymal stem cell of Wharton's jelly | 8.15e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 3.83e-16 | 2 |
ventricle of nervous system | 3.83e-16 | 2 |
choroid plexus | 3.83e-16 | 2 |
brain ventricle | 3.83e-16 | 2 |
ventricular system of brain | 3.83e-16 | 2 |
ventricular system of central nervous system | 3.83e-16 | 2 |
intralobular bile duct | 9.46e-09 | 1 |
acinus | 9.46e-09 | 1 |
intrahepatic bile duct | 9.46e-09 | 1 |
portal lobule | 9.46e-09 | 1 |
hepatic acinus | 9.46e-09 | 1 |
dura mater | 1.10e-08 | 1 |
future meninx | 1.10e-08 | 1 |
ectomeninx | 1.10e-08 | 1 |
future dura mater | 1.10e-08 | 1 |
brain vasculature | 5.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.29e-11 | 10 |
ovarian cancer | 2.58e-08 | 14 |