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FFCP PHASE1:Hg19::chr16:84228961..84228982,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr16:84228961..84228982,+
|coexpression_cluster_id=C41
|description=CAGE_peak_at_chr16:84228961..84228982,+
|description=CAGE_peak_at_chr16:84228961..84228982,+
|id=chr16:84228961..84228982,+
|id=chr16:84228961..84228982,+
|ontology_enrichment_celltype=CL:0002586!2.45e-34!3;CL:0000149!6.11e-26!4;CL:0000147!5.10e-13!14
|ontology_enrichment_celltype=CL:0002586!2.45e-34!3;CL:0000149!6.11e-26!4;CL:0000147!5.10e-13!14
|ontology_enrichment_celltype_v019=CL:0002586;6.39e-53;3!CL:0000149;4.94e-40;4!CL:0000147;2.82e-12;14
|ontology_enrichment_celltype_v019_2=CL:0002586,6.39e-53,3;CL:0000149,4.94e-40,4;CL:0000147,2.82e-12,14
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-14;3
|ontology_enrichment_disease=DOID:178!2.20e-12!1;DOID:326!2.20e-12!1;DOID:3978!2.20e-12!1;DOID:3394!2.20e-12!1;DOID:5844!2.20e-12!1;DOID:114!8.06e-07!2
|ontology_enrichment_disease=DOID:178!2.20e-12!1;DOID:326!2.20e-12!1;DOID:3978!2.20e-12!1;DOID:3394!2.20e-12!1;DOID:5844!2.20e-12!1;DOID:114!8.06e-07!2
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000966!2.09e-36!5;UBERON:0005388!2.09e-36!5;UBERON:0001802!2.09e-36!5;UBERON:0001781!2.45e-34!3;UBERON:0001782!2.45e-34!3;UBERON:0005424!2.45e-34!3;UBERON:0000020!2.53e-17!23;UBERON:0001032!1.37e-16!24;UBERON:0004456!1.37e-16!24;UBERON:0000970!3.97e-14!20;UBERON:0002104!1.88e-13!21;UBERON:0002022!4.81e-12!1;UBERON:0007625!8.10e-10!11;UBERON:0000019!8.66e-10!19;UBERON:0000047!8.66e-10!19;UBERON:0004088!8.66e-10!19;UBERON:0003072!8.66e-10!19;UBERON:0003071!8.66e-10!19;UBERON:0004128!8.66e-10!19;UBERON:0001456!7.12e-09!21;UBERON:0000007!6.42e-07!2
|ontology_enrichment_uberon_v019=UBERON:0000966;4.09e-71;5!UBERON:0005388;4.09e-71;5!UBERON:0001802;4.09e-71;5!UBERON:0001781;6.39e-53;3!UBERON:0001782;6.39e-53;3!UBERON:0000970;3.67e-32;20!UBERON:0002104;1.13e-30;21!UBERON:0000020;4.37e-28;23!UBERON:0001032;5.93e-27;24!UBERON:0004456;5.93e-27;24!UBERON:0000019;1.68e-19;19!UBERON:0000047;1.68e-19;19!UBERON:0004088;1.68e-19;19!UBERON:0010230;1.68e-19;19!UBERON:0001456;9.85e-18;21!UBERON:0007625;2.51e-15;11!UBERON:0000033;3.61e-08;50!UBERON:0001444;4.81e-07;48
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.82e-59,6;UBERON:0005388,1.82e-59,6;UBERON:0001802,1.82e-59,6;UBERON:0001782,6.39e-53,3;UBERON:0005424,6.39e-53,3;UBERON:0001781,4.94e-40,4;UBERON:0000970,1.13e-30,21;UBERON:0002104,1.13e-30,21;UBERON:0000020,5.93e-27,24;UBERON:0001032,5.93e-27,24;UBERON:0004456,5.93e-27,24;UBERON:0000019,1.42e-18,20;UBERON:0000047,1.42e-18,20;UBERON:0010312,1.42e-18,20;UBERON:0004088,1.42e-18,20;UBERON:0010230,1.42e-18,20;UBERON:0003072,1.42e-18,20;UBERON:0004128,1.42e-18,20;UBERON:0003071,1.42e-18,20;UBERON:0001456,5.72e-17,22;UBERON:0007625,2.51e-15,11;UBERON:0005085,2.68e-12,31;UBERON:0001444,4.54e-08,49;UBERON:0000033,3.76e-07,56
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|short_description=p@chr16:84228961..84228982,+
|short_description=p@chr16:84228961..84228982,+
}}
}}

Latest revision as of 12:52, 25 July 2015

Short description:p@chr16:84228961..84228982, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr16:84228961..84228982, +
Coexpression cluster:C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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