FFCP PHASE1:Hg19::chr16:86229885..86229905,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:86229885..86229905,+ | |||
|coexpression_cluster_id=C418 | |||
|description=CAGE_peak_at_chr16:86229885..86229905,+ | |description=CAGE_peak_at_chr16:86229885..86229905,+ | ||
|id=chr16:86229885..86229905,+ | |id=chr16:86229885..86229905,+ | ||
|ontology_enrichment_celltype=CL:0002504!3.03e-17!3;CL:1000279!3.03e-17!3;CL:1000280!3.03e-17!3;CL:0002622!2.97e-08!3 | |ontology_enrichment_celltype=CL:0002504!3.03e-17!3;CL:1000279!3.03e-17!3;CL:1000280!3.03e-17!3;CL:0002622!2.97e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002504;1.04e-39;3!CL:1000279;1.04e-39;3!CL:1000280;1.04e-39;3!CL:1000487;5.55e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,9.77e-40,3;CL:1000279,9.77e-40,3;CL:1000280,9.77e-40,3;CL:1000487,5.74e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;3.82e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.82e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000059!1.26e-30!11;UBERON:0001155!9.14e-29!9;UBERON:0000160!1.31e-25!27;UBERON:0005409!7.86e-23!35;UBERON:0001046!5.72e-17!19;UBERON:0001007!6.20e-16!155;UBERON:0001555!6.20e-16!155;UBERON:0007026!6.20e-16!155;UBERON:0004921!4.38e-15!129;UBERON:0004185!4.38e-15!129;UBERON:0004119!3.55e-14!169;UBERON:0000925!3.55e-14!169;UBERON:0006595!3.55e-14!169;UBERON:0000162!2.51e-13!14;UBERON:0001353!2.51e-13!14;UBERON:0000163!2.51e-13!14;UBERON:0006866!2.51e-13!14;UBERON:0000164!2.51e-13!14;UBERON:0000931!2.51e-13!14;UBERON:0004122!2.12e-12!15;UBERON:0001135!6.03e-09!15;UBERON:0000161!1.59e-08!35;UBERON:0003101!2.07e-08!22;UBERON:0000079!2.07e-08!22;UBERON:0002367!4.69e-08!11;UBERON:0010147!4.69e-08!11;UBERON:0009846!4.69e-08!11;UBERON:0003353!4.69e-08!11;UBERON:0004902!4.69e-08!11;UBERON:0003820!4.69e-08!11;UBERON:0009847!4.69e-08!11;UBERON:0003937!2.18e-07!12;UBERON:0005399!2.18e-07!12 | |ontology_enrichment_uberon=UBERON:0000059!1.26e-30!11;UBERON:0001155!9.14e-29!9;UBERON:0000160!1.31e-25!27;UBERON:0005409!7.86e-23!35;UBERON:0001046!5.72e-17!19;UBERON:0001007!6.20e-16!155;UBERON:0001555!6.20e-16!155;UBERON:0007026!6.20e-16!155;UBERON:0004921!4.38e-15!129;UBERON:0004185!4.38e-15!129;UBERON:0004119!3.55e-14!169;UBERON:0000925!3.55e-14!169;UBERON:0006595!3.55e-14!169;UBERON:0000162!2.51e-13!14;UBERON:0001353!2.51e-13!14;UBERON:0000163!2.51e-13!14;UBERON:0006866!2.51e-13!14;UBERON:0000164!2.51e-13!14;UBERON:0000931!2.51e-13!14;UBERON:0004122!2.12e-12!15;UBERON:0001135!6.03e-09!15;UBERON:0000161!1.59e-08!35;UBERON:0003101!2.07e-08!22;UBERON:0000079!2.07e-08!22;UBERON:0002367!4.69e-08!11;UBERON:0010147!4.69e-08!11;UBERON:0009846!4.69e-08!11;UBERON:0003353!4.69e-08!11;UBERON:0004902!4.69e-08!11;UBERON:0003820!4.69e-08!11;UBERON:0009847!4.69e-08!11;UBERON:0003937!2.18e-07!12;UBERON:0005399!2.18e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.07e-46;17!UBERON:0000059;8.58e-43;11!UBERON:0001155;1.96e-36;9!UBERON:0005409;5.62e-36;22!UBERON:0004921;2.84e-23;33!UBERON:0001135;2.58e-14;15!UBERON:0003101;5.98e-10;22!UBERON:0000079;5.98e-10;22!UBERON:0000473;1.40e-07;8!UBERON:0001555;3.35e-07;54!UBERON:0002385;5.36e-07;31!UBERON:0001015;5.36e-07;31!UBERON:0000383;5.36e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.72e-46,17;UBERON:0000059,6.66e-43,11;UBERON:0001155,1.51e-36,9;UBERON:0005409,8.72e-32,25;UBERON:0001135,2.67e-14,15;UBERON:0004921,5.00e-10,118;UBERON:0003101,5.84e-10,22;UBERON:0000079,5.84e-10,22;UBERON:0001007,5.96e-08,145;UBERON:0001555,5.96e-08,145;UBERON:0007026,5.96e-08,145;UBERON:0000473,1.40e-07,8;UBERON:0004119,4.27e-07,160;UBERON:0000925,4.27e-07,160;UBERON:0006595,4.27e-07,160;UBERON:0001046,6.37e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574072240823034,0,2.88473712910733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43897966066652,2.19629623788844,1.53156123049392,0,0,0,0,0,0,0,2.40389234321312,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.176915129006678,2.4441205797345,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6433565297284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,3.65263488203798,0,0,0,0,0,0,9.62053637676303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.874238242015829,0,2.20633489578515,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,1.21245917149183,8.30688803484153,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574072240823034,0,2.88473712910733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43897966066652,2.19629623788844,1.53156123049392,0,0,0,0,0,0,0,2.40389234321312,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.176915129006678,2.4441205797345,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6433565297284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,3.65263488203798,0,0,0,0,0,0,9.62053637676303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.874238242015829,0,2.20633489578515,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,1.21245917149183,8.30688803484153,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr16:86229885..86229905,+ | |short_description=p@chr16:86229885..86229905,+ | ||
}} | }} |
Latest revision as of 13:05, 25 July 2015
Short description: | p@chr16:86229885..86229905, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86229885..86229905, + |
Coexpression cluster: | C418_normal_Melanocyte_Hep2_cervical_umbilical_osteosarcoma_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 9.77e-40 | 3 |
smooth muscle cell of large intestine | 9.77e-40 | 3 |
smooth muscle cell of colon | 9.77e-40 | 3 |
smooth muscle cell of prostate | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.72e-46 | 17 |
large intestine | 6.66e-43 | 11 |
colon | 1.51e-36 | 9 |
gastrointestinal system | 8.72e-32 | 25 |
smooth muscle tissue | 2.67e-14 | 15 |
subdivision of digestive tract | 5.00e-10 | 118 |
male organism | 5.84e-10 | 22 |
male reproductive system | 5.84e-10 | 22 |
digestive system | 5.96e-08 | 145 |
digestive tract | 5.96e-08 | 145 |
primitive gut | 5.96e-08 | 145 |
testis | 1.40e-07 | 8 |
endoderm-derived structure | 4.27e-07 | 160 |
endoderm | 4.27e-07 | 160 |
presumptive endoderm | 4.27e-07 | 160 |
hindgut | 6.37e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.82e-08 | 2 |