FFCP PHASE1:Hg19::chr17:30059110..30059117,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:30059110..30059117,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr17:30059110..30059117,+ | |||
|id=chr17:30059110..30059117,+ | |||
|ontology_enrichment_celltype=CL:0002379!3.73e-07!1;CL:0002127!6.60e-07!1;CL:0000914!6.60e-07!1;CL:0000911!6.60e-07!1;CL:0000814!6.60e-07!1;CL:0002042!6.60e-07!1;CL:0002039!6.60e-07!1;CL:0002040!6.60e-07!1;CL:0002041!6.60e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002379;8.34e-34;1!CL:0000307;3.06e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,7.06e-34,1;CL:0000068,3.24e-12,3;CL:0000069,3.24e-12,3;CL:0000307,3.24e-12,3;CL:0000377,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.25e-14;10!UBERON:0005564;3.25e-14;10!CL:0000377;3.06e-12;3 | |||
|ontology_enrichment_disease=DOID:6193!3.13e-07!1;DOID:162!3.42e-07!235;DOID:3620!3.73e-07!1;DOID:3565!3.73e-07!1;DOID:14566!6.04e-07!239;DOID:178!8.75e-07!1;DOID:326!8.75e-07!1;DOID:3978!8.75e-07!1;DOID:3394!8.75e-07!1;DOID:5844!8.75e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.58e-34;1!DOID:3620;8.34e-34;1!DOID:3565;8.34e-34;1!DOID:3350;6.48e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.58e-34,1;DOID:3620,7.06e-34,1;DOID:3565,7.06e-34,1;DOID:3350,6.48e-18,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.70e-17;8!UBERON:0003135;5.10e-13;11!UBERON:0000991;2.77e-07;21!UBERON:0003101;5.40e-07;22!UBERON:0000079;5.40e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.71e-17,8;UBERON:0003135,5.10e-13,11;UBERON:0000991,2.77e-07,21;UBERON:0009196,2.77e-07,21;UBERON:0009117,2.77e-07,21;UBERON:0005564,2.77e-07,21;UBERON:0004176,5.40e-07,22;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22 | |||
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|short_description=p@chr17:30059110..30059117,+ | |||
}} | }} |
Latest revision as of 15:24, 25 July 2015
Short description: | p@chr17:30059110..30059117, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:30059110..30059117, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 7.06e-34 | 1 |
duct epithelial cell | 3.24e-12 | 3 |
branched duct epithelial cell | 3.24e-12 | 3 |
tracheal epithelial cell | 3.24e-12 | 3 |
tracheoblast | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.71e-17 | 8 |
male reproductive organ | 5.10e-13 | 11 |
gonad | 2.77e-07 | 21 |
indifferent external genitalia | 2.77e-07 | 21 |
indifferent gonad | 2.77e-07 | 21 |
gonad primordium | 2.77e-07 | 21 |
external genitalia | 5.40e-07 | 22 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.58e-34 | 1 |
central nervous system cancer | 7.06e-34 | 1 |
meningioma | 7.06e-34 | 1 |
mesenchymal cell neoplasm | 6.48e-18 | 2 |