FFCP PHASE1:Hg19::chr17:39661541..39661564,+: Difference between revisions
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|id=chr17:39661541..39661564,+
|short_description=p@chr17:39661541..39661564,+
|description=CAGE_peak_at_chr17:39661541..39661564,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:39661541..39661564,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr17:39661541..39661564,+ | |||
|id=chr17:39661541..39661564,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.99e-16;1!UBERON:0000358;1.34e-15;1!UBERON:0008814;1.39e-08;2!UBERON:0010056;1.39e-08;2 | |||
|ontology_enrichment_disease=DOID:1749!6.88e-13!14;DOID:3151!6.65e-09!1;DOID:3149!6.65e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.38e-15;1!DOID:3149;2.38e-15;1!DOID:3451;2.48e-08;2!DOID:4159;2.48e-08;2!DOID:0060122;2.48e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.38e-15,1;DOID:3149,2.38e-15,1;DOID:3451,2.48e-08,2;DOID:4159,2.48e-08,2;DOID:0060122,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003127!5.02e-16!2;UBERON:0000341!7.31e-16!2;UBERON:0001723!2.07e-11!3;UBERON:0001033!2.07e-11!3;UBERON:0010056!2.07e-11!3;UBERON:0006562!2.95e-11!11;UBERON:0002372!7.75e-09!1;UBERON:0001961!7.75e-09!1;UBERON:0001744!7.75e-09!1;UBERON:0001735!7.75e-09!1;UBERON:0000997!1.65e-08!1;UBERON:0005056!1.65e-08!1;UBERON:0006834!2.06e-08!1;UBERON:0000065!5.80e-08!53;UBERON:0001042!1.78e-07!10;UBERON:0009145!1.78e-07!10;UBERON:0000072!3.10e-07!46;UBERON:0000974!3.34e-07!10;UBERON:0001004!4.89e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.48e-20;3!UBERON:0001033;2.48e-20;3!UBERON:0005795;5.56e-16;1!UBERON:0002372;3.41e-15;1!UBERON:0001961;3.41e-15;1!UBERON:0001744;3.41e-15;1!UBERON:0001042;3.41e-15;1!UBERON:0001735;3.41e-15;1!UBERON:0000002;1.90e-10;6!UBERON:0001560;1.90e-10;6!UBERON:0000341;1.86e-08;2!UBERON:0003127;2.15e-08;2!UBERON:0006562;2.97e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.48e-20,3;UBERON:0001033,2.48e-20,3;UBERON:0010056,2.48e-20,3;UBERON:0002372,3.17e-15,1;UBERON:0001961,3.17e-15,1;UBERON:0001744,3.17e-15,1;UBERON:0001735,3.17e-15,1;UBERON:0001042,1.67e-13,10;UBERON:0009145,1.67e-13,10;UBERON:0006562,2.49e-12,11;UBERON:0000002,1.99e-10,6;UBERON:0001560,1.99e-10,6;UBERON:0000341,1.86e-08,2;UBERON:0003127,2.15e-08,2;UBERON:0001557,2.27e-07,19 | |||
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|short_description=p@chr17:39661541..39661564,+ | |||
}} | }} |
Latest revision as of 16:41, 25 July 2015
Short description: | p@chr17:39661541..39661564, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39661541..39661564, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 2.48e-20 | 3 |
gustatory system | 2.48e-20 | 3 |
future tongue | 2.48e-20 | 3 |
tonsil | 3.17e-15 | 1 |
mucosa-associated lymphoid tissue | 3.17e-15 | 1 |
lymphoid tissue | 3.17e-15 | 1 |
tonsillar ring | 3.17e-15 | 1 |
chordate pharynx | 1.67e-13 | 10 |
pharyngeal region of foregut | 1.67e-13 | 10 |
pharynx | 2.49e-12 | 11 |
uterine cervix | 1.99e-10 | 6 |
neck of organ | 1.99e-10 | 6 |
throat | 1.86e-08 | 2 |
open tracheal system trachea | 2.15e-08 | 2 |
upper respiratory tract | 2.27e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.38e-15 | 1 |
keratoacanthoma | 2.38e-15 | 1 |
skin carcinoma | 2.48e-08 | 2 |
skin cancer | 2.48e-08 | 2 |
integumentary system cancer | 2.48e-08 | 2 |