FFCP PHASE1:Hg19::chr17:39929065..39929083,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:39929065..39929083,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr17:39929065..39929083,- | |||
|id=chr17:39929065..39929083,- | |||
|ontology_enrichment_celltype=CL:0000181!4.46e-24!12;CL:0000417!4.46e-24!12;CL:0000668!4.46e-24!12;CL:0000414!4.46e-24!12;CL:0000412!4.46e-24!12;CL:0000182!4.46e-24!12;CL:0000223!8.93e-10!59;CL:1001319!4.50e-09!1;CL:1000600!4.50e-09!1;CL:0002563!5.30e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.60e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.60e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.20e-09;11!UBERON:0009497;9.20e-08;13 | |||
|ontology_enrichment_disease=DOID:178!3.25e-09!1;DOID:326!3.25e-09!1;DOID:3978!3.25e-09!1;DOID:3394!3.25e-09!1;DOID:5844!3.25e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.24e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.24e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0009854!9.80e-34!23;UBERON:0009856!1.15e-29!26;UBERON:0008835!1.13e-28!22;UBERON:0003894!1.13e-28!22;UBERON:0002107!1.45e-26!19;UBERON:0006925!1.45e-26!19;UBERON:0008836!1.45e-26!19;UBERON:0007499!4.43e-25!25;UBERON:0009497!4.43e-25!25;UBERON:0000015!4.43e-25!25;UBERON:0002423!4.43e-25!25;UBERON:0006235!4.43e-25!25;UBERON:0004161!4.43e-25!25;UBERON:0003929!1.68e-19!54;UBERON:0005057!3.88e-19!26;UBERON:0002365!7.00e-16!31;UBERON:0002330!7.00e-16!31;UBERON:0003350!6.82e-15!5;UBERON:0005911!2.58e-14!82;UBERON:0002368!6.05e-14!35;UBERON:0005172!4.21e-13!55;UBERON:0005173!4.21e-13!55;UBERON:0004921!6.01e-13!129;UBERON:0004185!6.01e-13!129;UBERON:0002417!1.17e-11!61;UBERON:0000916!1.17e-11!61;UBERON:0000949!1.32e-10!45;UBERON:0001007!2.64e-10!155;UBERON:0001555!2.64e-10!155;UBERON:0007026!2.64e-10!155;UBERON:0002530!7.45e-10!59;UBERON:0001154!2.35e-09!1;UBERON:0001153!2.35e-09!1;UBERON:0004119!3.24e-09!169;UBERON:0000925!3.24e-09!169;UBERON:0006595!3.24e-09!169;UBERON:0004645!4.50e-09!1;UBERON:0001256!4.50e-09!1;UBERON:0001259!4.50e-09!1;UBERON:0001242!5.30e-09!4;UBERON:0001262!5.30e-09!4;UBERON:0004786!5.30e-09!4;UBERON:0004808!5.30e-09!4;UBERON:0001277!5.30e-09!4;UBERON:0001155!1.65e-08!9;UBERON:0000077!3.54e-08!130;UBERON:0000490!1.37e-07!138;UBERON:0004907!2.36e-07!5;UBERON:0005177!2.92e-07!107;UBERON:0000059!4.81e-07!11;UBERON:0000160!5.36e-07!27;UBERON:0001046!7.69e-07!19;UBERON:0009569!8.56e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.21e-29;19!UBERON:0006925;3.21e-29;19!UBERON:0002423;2.72e-22;25!UBERON:0002365;5.44e-18;31!UBERON:0002330;5.44e-18;31!UBERON:0002368;1.44e-15;33!UBERON:0000949;2.45e-11;43!UBERON:0005172;3.17e-08;52!UBERON:0005173;3.17e-08;52!UBERON:0001007;1.78e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.21e-29,19;UBERON:0006925,3.21e-29,19;UBERON:0008836,3.21e-29,19;UBERON:0008835,2.76e-25,22;UBERON:0003894,2.76e-25,22;UBERON:0009854,3.35e-24,23;UBERON:0007499,2.72e-22,25;UBERON:0009497,2.72e-22,25;UBERON:0000015,2.72e-22,25;UBERON:0002423,2.72e-22,25;UBERON:0006235,2.72e-22,25;UBERON:0004161,2.72e-22,25;UBERON:0009856,1.91e-21,26;UBERON:0002365,4.92e-18,31;UBERON:0002330,4.92e-18,31;UBERON:0002368,5.28e-16,35;UBERON:0000949,1.70e-12,45;UBERON:0003929,1.92e-10,54;UBERON:0005172,1.92e-10,54;UBERON:0005173,1.92e-10,54;UBERON:0002530,1.43e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0005911,6.51e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,6.87979051674338,4.13552934676983,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.564214628977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08376524194607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.472699093843342,0.988990300573997,0.539228350833479,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,9.67244742275344,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68219434960993,0,0,0,0,0,0,0,0,0,0,1.31196068783506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:39929065..39929083,- | |||
}} |
Latest revision as of 16:49, 25 July 2015
Short description: | p@chr17:39929065..39929083, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39929065..39929083, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.60e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.21e-29 | 19 |
digestive gland | 3.21e-29 | 19 |
liver bud | 3.21e-29 | 19 |
hepatic diverticulum | 2.76e-25 | 22 |
liver primordium | 2.76e-25 | 22 |
digestive tract diverticulum | 3.35e-24 | 23 |
epithelial sac | 2.72e-22 | 25 |
epithelium of foregut-midgut junction | 2.72e-22 | 25 |
anatomical boundary | 2.72e-22 | 25 |
hepatobiliary system | 2.72e-22 | 25 |
foregut-midgut junction | 2.72e-22 | 25 |
septum transversum | 2.72e-22 | 25 |
sac | 1.91e-21 | 26 |
exocrine gland | 4.92e-18 | 31 |
exocrine system | 4.92e-18 | 31 |
endocrine gland | 5.28e-16 | 35 |
endocrine system | 1.70e-12 | 45 |
gut epithelium | 1.92e-10 | 54 |
abdomen element | 1.92e-10 | 54 |
abdominal segment element | 1.92e-10 | 54 |
gland | 1.43e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
endo-epithelium | 6.51e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.24e-12 | 2 |