FFCP PHASE1:Hg19::chr17:40324009..40324020,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:40324009..40324020,- | |||
|coexpression_cluster_id=C441 | |||
|description=CAGE_peak_at_chr17:40324009..40324020,- | |description=CAGE_peak_at_chr17:40324009..40324020,- | ||
|id=chr17:40324009..40324020,- | |id=chr17:40324009..40324020,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.90e-11;3!UBERON:0003353;9.90e-11;3 | |||
|ontology_enrichment_disease=DOID:1749!9.15e-24!14;DOID:3151!9.79e-09!1;DOID:3149!9.79e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;7.48e-30;1!DOID:3149;7.48e-30;1!DOID:3451;1.15e-15;2!DOID:4159;1.15e-15;2!DOID:0060122;1.15e-15;2!DOID:1749;4.75e-09;14!DOID:4362;5.08e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.48e-30,1;DOID:3149,7.48e-30,1;DOID:3451,1.15e-15,2;DOID:4159,1.15e-15,2;DOID:0060122,1.15e-15,2;DOID:1749,4.75e-09,14;DOID:4362,5.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003343!2.38e-16!4;UBERON:0004785!2.38e-16!4;UBERON:0003729!3.43e-13!5;UBERON:0009663!1.53e-09!7;UBERON:0000997!1.75e-08!1;UBERON:0005056!1.75e-08!1;UBERON:0001000!2.17e-08!1;UBERON:0005352!2.17e-08!1;UBERON:0001882!2.89e-08!1;UBERON:0005403!2.89e-08!1;UBERON:0002022!7.16e-08!1;UBERON:0000369!8.83e-08!4;UBERON:0002435!8.83e-08!4;UBERON:0000204!8.83e-08!4;UBERON:0010082!8.83e-08!4;UBERON:0002308!1.60e-07!9;UBERON:0002420!1.60e-07!9;UBERON:0000125!1.60e-07!9;UBERON:0007245!1.60e-07!9;UBERON:0010009!1.60e-07!9;UBERON:0010011!1.60e-07!9;UBERON:0000454!1.60e-07!9;UBERON:0000974!7.88e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001875;2.05e-15;2!UBERON:0006514;2.05e-15;2!UBERON:0000014;1.70e-08;4!UBERON:0003343;2.26e-08;4!UBERON:0004785;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,2.05e-15,2;UBERON:0006514,2.05e-15,2;UBERON:0000014,1.70e-08,4;UBERON:0003343,2.61e-08,4;UBERON:0004785,2.61e-08,4 | |||
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|short_description=p@chr17:40324009..40324020,- | |short_description=p@chr17:40324009..40324020,- | ||
}} | }} |
Latest revision as of 16:57, 25 July 2015
Short description: | p@chr17:40324009..40324020, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:40324009..40324020, - |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
globus pallidus | 2.05e-15 | 2 |
pallidum | 2.05e-15 | 2 |
zone of skin | 1.70e-08 | 4 |
mucosa of oral region | 2.61e-08 | 4 |
respiratory system mucosa | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.48e-30 | 1 |
keratoacanthoma | 7.48e-30 | 1 |
skin carcinoma | 1.15e-15 | 2 |
skin cancer | 1.15e-15 | 2 |
integumentary system cancer | 1.15e-15 | 2 |
squamous cell carcinoma | 4.75e-09 | 14 |
cervical cancer | 5.08e-07 | 5 |