FFCP PHASE1:Hg19::chr17:42635121..42635149,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_AB590852_5end | |association_with_transcript=65bp_to_AB590852_5end | ||
|cluster_id=chr17:42635121..42635149,+ | |||
|coexpression_cluster_id=C1781 | |||
|description=CAGE_peak_1_at_AB590852_5end | |description=CAGE_peak_1_at_AB590852_5end | ||
|id=chr17:42635121..42635149,+ | |id=chr17:42635121..42635149,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.33e-16!180;CL:0000057!1.35e-11!75;CL:0000133!7.36e-08!59 | |ontology_enrichment_celltype=CL:0000055!4.33e-16!180;CL:0000057!1.35e-11!75;CL:0000133!7.36e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000075;6.87e-09;27!CL:0000306;8.39e-09;4!CL:0002222;8.39e-09;4!CL:0002224;8.39e-09;4!CL:0000346;9.40e-09;3!CL:1000428;9.40e-09;3!CL:0000708;2.13e-08;3!CL:0000064;5.22e-07;3!CL:0000067;5.22e-07;3!CL:0005012;5.22e-07;3!CL:0002304;5.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,3.01e-09,27;CL:0000306,5.19e-09,4;CL:0002222,5.19e-09,4;CL:0002224,5.19e-09,4;CL:0000346,9.44e-09,3;CL:1000428,9.44e-09,3;CL:0000708,2.16e-08,3;CL:0000133,1.24e-07,59;CL:0000064,2.15e-07,3;CL:0000067,2.15e-07,3;CL:0005012,2.15e-07,3;CL:0002304,2.15e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!1.95e-08!11;UBERON:0002200!2.81e-08!11;UBERON:0006876!2.81e-08!11;UBERON:0001456!2.36e-07!21;UBERON:0000019!2.60e-07!19;UBERON:0000047!2.60e-07!19;UBERON:0004088!2.60e-07!19;UBERON:0003072!2.60e-07!19;UBERON:0003071!2.60e-07!19;UBERON:0004128!2.60e-07!19;UBERON:0000914!2.73e-07!83;UBERON:0002329!2.73e-07!83;UBERON:0003077!2.73e-07!83;UBERON:0003059!2.73e-07!83;UBERON:0007282!2.73e-07!83;UBERON:0009618!2.73e-07!83;UBERON:0007285!2.73e-07!83;UBERON:0005085!7.78e-07!29 | |ontology_enrichment_uberon=UBERON:0007625!1.95e-08!11;UBERON:0002200!2.81e-08!11;UBERON:0006876!2.81e-08!11;UBERON:0001456!2.36e-07!21;UBERON:0000019!2.60e-07!19;UBERON:0000047!2.60e-07!19;UBERON:0004088!2.60e-07!19;UBERON:0003072!2.60e-07!19;UBERON:0003071!2.60e-07!19;UBERON:0004128!2.60e-07!19;UBERON:0000914!2.73e-07!83;UBERON:0002329!2.73e-07!83;UBERON:0003077!2.73e-07!83;UBERON:0003059!2.73e-07!83;UBERON:0007282!2.73e-07!83;UBERON:0009618!2.73e-07!83;UBERON:0007285!2.73e-07!83;UBERON:0005085!7.78e-07!29 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.41e-11;11!UBERON:0006876;8.18e-10;11!UBERON:0010077;8.39e-09;4!UBERON:0005389;8.39e-09;4!UBERON:0000484;8.39e-09;4!UBERON:0000965;8.39e-09;4!UBERON:0001803;8.39e-09;4!UBERON:0000412;9.40e-09;3!UBERON:0001992;9.40e-09;3!UBERON:0001801;9.97e-09;14!UBERON:0005284;1.19e-08;5!UBERON:0001456;1.45e-08;21!UBERON:0003210;2.13e-08;3!UBERON:0000019;1.17e-07;19!UBERON:0000047;1.17e-07;19!UBERON:0004088;1.17e-07;19!UBERON:0010230;1.17e-07;19!UBERON:0010371;2.58e-07;31!UBERON:0000970;3.43e-07;20!UBERON:0001778;5.22e-07;3!UBERON:0001775;5.22e-07;3!UBERON:0002104;9.05e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.94e-11,11;UBERON:0006876,4.40e-10,11;UBERON:0001801,4.83e-09,14;UBERON:0010077,5.19e-09,4;UBERON:0005389,5.19e-09,4;UBERON:0000484,5.19e-09,4;UBERON:0002546,5.19e-09,4;UBERON:0000965,5.19e-09,4;UBERON:0001803,5.19e-09,4;UBERON:0003073,5.19e-09,4;UBERON:0005426,5.19e-09,4;UBERON:0000412,9.44e-09,3;UBERON:0001992,9.44e-09,3;UBERON:0005284,1.10e-08,5;UBERON:0003210,2.16e-08,3;UBERON:0001456,3.07e-08,22;UBERON:0005085,4.49e-08,31;UBERON:0001778,2.15e-07,3;UBERON:0001775,2.15e-07,3;UBERON:0000019,2.48e-07,20;UBERON:0000047,2.48e-07,20;UBERON:0010312,2.48e-07,20;UBERON:0004088,2.48e-07,20;UBERON:0010230,2.48e-07,20;UBERON:0003072,2.48e-07,20;UBERON:0004128,2.48e-07,20;UBERON:0003071,2.48e-07,20;UBERON:0000970,6.67e-07,21;UBERON:0002104,6.67e-07,21 | |||
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| ||
|short_description=p1@AB590852 | |short_description=p1@AB590852 | ||
}} | }} |
Latest revision as of 17:27, 25 July 2015
Short description: | p1@AB590852 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB590852_5end |
Coexpression cluster: | C1781_anaplastic_Hair_Pericytes_mesothelioma_Fibroblast_lens_transitionalcell |
Association with transcript: | 65bp_to_AB590852_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 3.01e-09 | 27 |
crystallin accumulating cell | 5.19e-09 | 4 |
vertebrate lens cell | 5.19e-09 | 4 |
lens epithelial cell | 5.19e-09 | 4 |
hair follicle dermal papilla cell | 9.44e-09 | 3 |
stem cell of epidermis | 9.44e-09 | 3 |
leptomeningeal cell | 2.16e-08 | 3 |
neurectodermal cell | 1.24e-07 | 59 |
ciliated cell | 2.15e-07 | 3 |
ciliated epithelial cell | 2.15e-07 | 3 |
multi-ciliated epithelial cell | 2.15e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.94e-11 | 11 |
vasculature of organ | 4.40e-10 | 11 |
anterior segment of eyeball | 4.83e-09 | 14 |
cuboidal epithelium | 5.19e-09 | 4 |
transparent eye structure | 5.19e-09 | 4 |
simple cuboidal epithelium | 5.19e-09 | 4 |
cranial placode | 5.19e-09 | 4 |
lens of camera-type eye | 5.19e-09 | 4 |
epithelium of lens | 5.19e-09 | 4 |
lens placode | 5.19e-09 | 4 |
lens vesicle | 5.19e-09 | 4 |
dermal papilla | 9.44e-09 | 3 |
papillary layer of dermis | 9.44e-09 | 3 |
brain vasculature | 1.10e-08 | 5 |
blood-cerebrospinal fluid barrier | 2.16e-08 | 3 |
face | 3.07e-08 | 22 |
ectodermal placode | 4.49e-08 | 31 |
ciliary epithelium | 2.15e-07 | 3 |
ciliary body | 2.15e-07 | 3 |
camera-type eye | 2.48e-07 | 20 |
simple eye | 2.48e-07 | 20 |
immature eye | 2.48e-07 | 20 |
ocular region | 2.48e-07 | 20 |
eyeball of camera-type eye | 2.48e-07 | 20 |
optic cup | 2.48e-07 | 20 |
optic vesicle | 2.48e-07 | 20 |
eye primordium | 2.48e-07 | 20 |
eye | 6.67e-07 | 21 |
visual system | 6.67e-07 | 21 |