FFCP PHASE1:Hg19::chr17:48145468..48145508,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48145468..48145508,+ | |||
|coexpression_cluster_id=C3652 | |coexpression_cluster_id=C3652 | ||
|description=CAGE_peak_at_chr17:48145468..48145508,+ | |description=CAGE_peak_at_chr17:48145468..48145508,+ | ||
|id=chr17:48145468..48145508,+ | |id=chr17:48145468..48145508,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.67e-31!254;CL:0000220!3.39e-22!246;CL:0002321!1.66e-21!248;CL:0002076!1.59e-13!43;CL:0000077!3.16e-10!19;CL:1000497!7.58e-10!18;CL:0002518!7.58e-10!18;CL:0000223!7.72e-10!59;CL:1000449!1.54e-09!16;CL:0000548!3.44e-09!679;CL:0000004!3.44e-09!679;CL:0000255!3.44e-09!679;CL:0000012!1.09e-08!682;CL:0002368!2.21e-08!13;CL:0000076!2.55e-08!62;CL:0002681!9.96e-08!13;CL:0002584!9.96e-08!13;CL:1000507!1.95e-07!12;CL:1000494!1.95e-07!12;CL:0002077!4.71e-07!33;CL:0000222!9.68e-07!119 | |ontology_enrichment_celltype=CL:0000066!4.67e-31!254;CL:0000220!3.39e-22!246;CL:0002321!1.66e-21!248;CL:0002076!1.59e-13!43;CL:0000077!3.16e-10!19;CL:1000497!7.58e-10!18;CL:0002518!7.58e-10!18;CL:0000223!7.72e-10!59;CL:1000449!1.54e-09!16;CL:0000548!3.44e-09!679;CL:0000004!3.44e-09!679;CL:0000255!3.44e-09!679;CL:0000012!1.09e-08!682;CL:0002368!2.21e-08!13;CL:0000076!2.55e-08!62;CL:0002681!9.96e-08!13;CL:0002584!9.96e-08!13;CL:1000507!1.95e-07!12;CL:1000494!1.95e-07!12;CL:0002077!4.71e-07!33;CL:0000222!9.68e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.19e-15;19!CL:1000449;7.78e-14;15!CL:1000497;2.45e-13;17!CL:0002518;2.45e-13;17!CL:0002076;9.86e-13;42!CL:0002368;5.54e-12;13!CL:0002681;1.07e-10;12!CL:0002584;1.07e-10;12!CL:1000507;1.37e-09;10!CL:1000494;1.37e-09;10!CL:0002202;1.88e-08;9!CL:0002632;1.88e-08;9!CL:0000154;3.81e-07;6!CL:0002159;4.91e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.60e-25,253;CL:0002321,2.99e-23,250;CL:0002076,1.42e-17,42;CL:0000077,2.19e-15,19;CL:1000449,9.09e-14,15;CL:1000497,3.04e-13,17;CL:0002518,3.04e-13,17;CL:0000223,3.80e-13,58;CL:0002368,5.19e-12,13;CL:0002681,1.29e-10,12;CL:0002584,1.29e-10,12;CL:1000507,1.30e-09,10;CL:1000494,1.30e-09,10;CL:0000076,4.14e-09,63;CL:0002202,2.69e-08,9;CL:0002632,2.69e-08,9;CL:0000222,5.60e-08,121;CL:0002077,2.40e-07,34;CL:0000154,3.04e-07,6;CL:0002159,3.59e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;1.11e-07;58 | |||
|ontology_enrichment_disease_v019=DOID:193;1.46e-07;29!DOID:120;3.65e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:193,1.06e-07,29;DOID:120,2.71e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.52e-11!347;UBERON:0000475!8.22e-11!365;UBERON:0003104!2.15e-10!238;UBERON:0009142!2.15e-10!238;UBERON:0004876!4.87e-10!20;UBERON:0000058!8.40e-10!26;UBERON:0004211!1.54e-09!16;UBERON:0001285!1.54e-09!16;UBERON:0007684!1.54e-09!16;UBERON:0003220!1.54e-09!16;UBERON:0004208!1.54e-09!16;UBERON:0006555!2.04e-09!17;UBERON:0005103!2.04e-09!17;UBERON:0000083!2.04e-09!17;UBERON:0009201!2.04e-09!17;UBERON:0004819!2.04e-09!17;UBERON:0006553!2.04e-09!17;UBERON:0003074!2.04e-09!17;UBERON:0003060!2.04e-09!17;UBERON:0000080!2.27e-09!18;UBERON:0002120!2.27e-09!18;UBERON:0004875!2.27e-09!18;UBERON:0005721!2.27e-09!18;UBERON:0005754!2.27e-09!18;UBERON:0007297!2.27e-09!18;UBERON:0002100!2.68e-09!216;UBERON:0005256!5.01e-09!143;UBERON:0000464!1.42e-08!104;UBERON:0006554!7.65e-08!44;UBERON:0003887!8.80e-08!21;UBERON:0001225!9.96e-08!13;UBERON:0008987!9.96e-08!13;UBERON:0000353!1.18e-07!17;UBERON:0003064!1.21e-07!37;UBERON:0009773!1.95e-07!12;UBERON:0001231!1.95e-07!12;UBERON:0004810!1.95e-07!12;UBERON:0000119!2.04e-07!312;UBERON:0001008!2.23e-07!45;UBERON:0000483!2.23e-07!309;UBERON:0000467!5.64e-07!625;UBERON:0000468!6.19e-07!659;UBERON:0001851!6.90e-07!16;UBERON:0000466!7.51e-07!126;UBERON:0000480!7.79e-07!626;UBERON:0001048!8.25e-07!168 | |ontology_enrichment_uberon=UBERON:0000481!1.52e-11!347;UBERON:0000475!8.22e-11!365;UBERON:0003104!2.15e-10!238;UBERON:0009142!2.15e-10!238;UBERON:0004876!4.87e-10!20;UBERON:0000058!8.40e-10!26;UBERON:0004211!1.54e-09!16;UBERON:0001285!1.54e-09!16;UBERON:0007684!1.54e-09!16;UBERON:0003220!1.54e-09!16;UBERON:0004208!1.54e-09!16;UBERON:0006555!2.04e-09!17;UBERON:0005103!2.04e-09!17;UBERON:0000083!2.04e-09!17;UBERON:0009201!2.04e-09!17;UBERON:0004819!2.04e-09!17;UBERON:0006553!2.04e-09!17;UBERON:0003074!2.04e-09!17;UBERON:0003060!2.04e-09!17;UBERON:0000080!2.27e-09!18;UBERON:0002120!2.27e-09!18;UBERON:0004875!2.27e-09!18;UBERON:0005721!2.27e-09!18;UBERON:0005754!2.27e-09!18;UBERON:0007297!2.27e-09!18;UBERON:0002100!2.68e-09!216;UBERON:0005256!5.01e-09!143;UBERON:0000464!1.42e-08!104;UBERON:0006554!7.65e-08!44;UBERON:0003887!8.80e-08!21;UBERON:0001225!9.96e-08!13;UBERON:0008987!9.96e-08!13;UBERON:0000353!1.18e-07!17;UBERON:0003064!1.21e-07!37;UBERON:0009773!1.95e-07!12;UBERON:0001231!1.95e-07!12;UBERON:0004810!1.95e-07!12;UBERON:0000119!2.04e-07!312;UBERON:0001008!2.23e-07!45;UBERON:0000483!2.23e-07!309;UBERON:0000467!5.64e-07!625;UBERON:0000468!6.19e-07!659;UBERON:0001851!6.90e-07!16;UBERON:0000466!7.51e-07!126;UBERON:0000480!7.79e-07!626;UBERON:0001048!8.25e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.78e-14;15!UBERON:0004819;7.78e-14;15!UBERON:0001285;7.78e-14;15!UBERON:0007684;7.78e-14;15!UBERON:0000353;2.50e-11;15!UBERON:0001225;1.07e-10;12!UBERON:0008987;1.07e-10;12!UBERON:0006554;2.08e-10;30!UBERON:0001008;2.08e-10;30!UBERON:0004211;1.37e-09;10!UBERON:0009773;1.37e-09;10!UBERON:0001231;1.37e-09;10!UBERON:0004810;1.37e-09;10!UBERON:0001851;2.28e-09;15!UBERON:0002113;3.74e-08;24!UBERON:0011143;3.74e-08;24 | |||
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| ||
|short_description=p@chr17:48145468..48145508,+ | |short_description=p@chr17:48145468..48145508,+ | ||
}} | }} |
Latest revision as of 18:26, 25 July 2015
Short description: | p@chr17:48145468..48145508, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48145468..48145508, + |
Coexpression cluster: | C3652_Bronchial_meningioma_papillary_Prostate_mesenchymal_Tracheal_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.60e-25 | 253 |
embryonic cell | 2.99e-23 | 250 |
endo-epithelial cell | 1.42e-17 | 42 |
mesothelial cell | 2.19e-15 | 19 |
epithelial cell of nephron | 9.09e-14 | 15 |
kidney cell | 3.04e-13 | 17 |
kidney epithelial cell | 3.04e-13 | 17 |
endodermal cell | 3.80e-13 | 58 |
respiratory epithelial cell | 5.19e-12 | 13 |
kidney cortical cell | 1.29e-10 | 12 |
renal cortical epithelial cell | 1.29e-10 | 12 |
kidney tubule cell | 1.30e-09 | 10 |
nephron tubule epithelial cell | 1.30e-09 | 10 |
squamous epithelial cell | 4.14e-09 | 63 |
epithelial cell of tracheobronchial tree | 2.69e-08 | 9 |
epithelial cell of lower respiratory tract | 2.69e-08 | 9 |
mesodermal cell | 5.60e-08 | 121 |
ecto-epithelial cell | 2.40e-07 | 34 |
protein secreting cell | 3.04e-07 | 6 |
general ecto-epithelial cell | 3.59e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 9.09e-14 | 15 |
renal tubule | 9.09e-14 | 15 |
nephron tubule | 9.09e-14 | 15 |
nephron | 9.09e-14 | 15 |
uriniferous tubule | 9.09e-14 | 15 |
nephrogenic mesenchyme | 9.09e-14 | 15 |
excretory tube | 1.23e-12 | 16 |
kidney epithelium | 1.23e-12 | 16 |
parenchyma | 3.01e-11 | 15 |
cortex of kidney | 1.29e-10 | 12 |
renal parenchyma | 1.29e-10 | 12 |
nephron tubule epithelium | 1.30e-09 | 10 |
cortex | 2.85e-09 | 15 |
urinary system structure | 3.24e-07 | 47 |
kidney | 3.70e-07 | 26 |
kidney mesenchyme | 3.70e-07 | 26 |
upper urinary tract | 3.70e-07 | 26 |
kidney rudiment | 3.70e-07 | 26 |
kidney field | 3.70e-07 | 26 |
renal system | 6.09e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 1.06e-07 | 29 |
female reproductive organ cancer | 2.71e-07 | 27 |