FFCP PHASE1:Hg19::chr17:48169991..48169992,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48169991..48169992,+ | |||
|description=CAGE_peak_at_chr17:48169991..48169992,+ | |description=CAGE_peak_at_chr17:48169991..48169992,+ | ||
|id=chr17:48169991..48169992,+ | |id=chr17:48169991..48169992,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.48e-21!254;CL:0002076!3.70e-12!43;CL:0000220!1.29e-10!246;CL:0002321!2.32e-10!248;CL:0000223!8.98e-10!59;CL:0002251!4.40e-08!21;CL:0000076!7.89e-07!62 | |ontology_enrichment_celltype=CL:0000066!6.48e-21!254;CL:0002076!3.70e-12!43;CL:0000220!1.29e-10!246;CL:0002321!2.32e-10!248;CL:0000223!8.98e-10!59;CL:0002251!4.40e-08!21;CL:0000076!7.89e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.80e-18;3!CL:0000322;8.31e-09;3!CL:0002076;1.65e-08;42!CL:0000342;3.20e-07;1!CL:0002565;3.20e-07;1!CL:0000244;5.18e-07;4!CL:0000731;5.18e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.76e-18,3;CL:0002076,6.82e-10,42;CL:0000322,1.24e-08,3;CL:0000066,1.39e-08,253;CL:0000244,5.36e-07,4;CL:0000731,5.36e-07,4;CL:0000342,6.20e-07,1;CL:0002565,6.20e-07,1;CL:0000223,9.07e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.29e-09!106;DOID:0050687!5.13e-08!143;DOID:1749!1.04e-07!14;DOID:193!6.62e-07!29 | |ontology_enrichment_disease=DOID:305!3.29e-09!106;DOID:0050687!5.13e-08!143;DOID:1749!1.04e-07!14;DOID:193!6.62e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:3910;8.98e-13;2!DOID:3112;3.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.64e-12,2;DOID:3112,2.52e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.80e-18;3!UBERON:0004903;8.98e-13;2!UBERON:0002173;8.98e-13;2!UBERON:0002186;8.98e-13;2!UBERON:0000486;2.84e-12;12!UBERON:0004807;4.11e-09;22!UBERON:0004821;8.31e-09;3!UBERON:0007499;8.31e-09;3!UBERON:0003215;8.31e-09;3!UBERON:0010368;8.31e-09;3!UBERON:0009911;8.31e-09;3!UBERON:0002299;8.31e-09;3!UBERON:0006524;8.31e-09;3!UBERON:0008874;8.31e-09;3!UBERON:0002169;8.31e-09;3!UBERON:0004894;8.31e-09;3!UBERON:0005911;3.37e-08;36!UBERON:0003929;4.01e-08;7!UBERON:0002506;3.20e-07;1!UBERON:0001769;3.20e-07;1!UBERON:0003350;3.67e-07;8!UBERON:0001828;3.67e-07;8!UBERON:0009856;8.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.76e-18,3;UBERON:0004903,1.64e-12,2;UBERON:0002173,1.64e-12,2;UBERON:0002186,1.64e-12,2;UBERON:0004821,1.24e-08,3;UBERON:0003215,1.24e-08,3;UBERON:0010368,1.24e-08,3;UBERON:0009911,1.24e-08,3;UBERON:0002299,1.24e-08,3;UBERON:0006524,1.24e-08,3;UBERON:0008874,1.24e-08,3;UBERON:0002169,1.24e-08,3;UBERON:0004894,1.24e-08,3;UBERON:0003350,3.10e-07,8;UBERON:0001828,3.10e-07,8;UBERON:0004807,4.99e-07,28;UBERON:0002506,6.20e-07,1;UBERON:0001769,6.20e-07,1 | |||
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| ||
|short_description=p@chr17:48169991..48169992,+ | |short_description=p@chr17:48169991..48169992,+ | ||
}} | }} |
Latest revision as of 18:27, 25 July 2015
Short description: | p@chr17:48169991..48169992, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48169991..48169992, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.76e-18 | 3 |
endo-epithelial cell | 6.82e-10 | 42 |
pneumocyte | 1.24e-08 | 3 |
epithelial cell | 1.39e-08 | 253 |
transitional epithelial cell | 5.36e-07 | 4 |
urothelial cell | 5.36e-07 | 4 |
pigment cell (sensu Vertebrata) | 6.20e-07 | 1 |
iris pigment epithelial cell | 6.20e-07 | 1 |
endodermal cell | 9.07e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.76e-18 | 3 |
bronchoalveolar duct junction | 1.64e-12 | 2 |
alveolar duct | 1.64e-12 | 2 |
bronchiole | 1.64e-12 | 2 |
pulmonary alveolus epithelium | 1.24e-08 | 3 |
alveolus | 1.24e-08 | 3 |
pulmonary lobule | 1.24e-08 | 3 |
lobule | 1.24e-08 | 3 |
alveolus of lung | 1.24e-08 | 3 |
alveolar system | 1.24e-08 | 3 |
pulmonary acinus | 1.24e-08 | 3 |
alveolar sac | 1.24e-08 | 3 |
alveolar wall | 1.24e-08 | 3 |
epithelium of mucosa | 3.10e-07 | 8 |
gingiva | 3.10e-07 | 8 |
respiratory system epithelium | 4.99e-07 | 28 |
iris epithelium | 6.20e-07 | 1 |
iris | 6.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.64e-12 | 2 |
papillary adenocarcinoma | 2.52e-07 | 1 |