FFCP PHASE1:Hg19::chr17:55485285..55485317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:55485285..55485317,+ | |||
|description=CAGE_peak_at_chr17:55485285..55485317,+ | |description=CAGE_peak_at_chr17:55485285..55485317,+ | ||
|id=chr17:55485285..55485317,+ | |id=chr17:55485285..55485317,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.17e-15;12!CL:0000047;3.70e-11;2!CL:0002178;5.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-15,12;CL:0000223,1.01e-08,58;CL:0002178,5.54e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.12e-17;11!UBERON:0009497;1.65e-14;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.10e-40;2!DOID:299;8.61e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.98e-41,2;DOID:299,8.61e-08,25 | |||
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| ||
|short_description=p@chr17:55485285..55485317,+ | |short_description=p@chr17:55485285..55485317,+ | ||
}} | }} |
Latest revision as of 19:10, 25 July 2015
Short description: | p@chr17:55485285..55485317, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:55485285..55485317, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-15 | 12 |
endodermal cell | 1.01e-08 | 58 |
epithelial cell of stomach | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.52e-11 | 2 |
regional part of epithalamus | 4.52e-11 | 2 |
secretory circumventricular organ | 4.52e-11 | 2 |
circumventricular organ | 4.52e-11 | 2 |
epithalamus | 4.52e-11 | 2 |
liver | 3.68e-10 | 19 |
digestive gland | 3.68e-10 | 19 |
liver bud | 3.68e-10 | 19 |
endocrine gland | 1.78e-09 | 35 |
hepatic diverticulum | 7.41e-09 | 22 |
liver primordium | 7.41e-09 | 22 |
digestive tract diverticulum | 1.70e-08 | 23 |
medulla oblongata | 7.26e-08 | 3 |
myelencephalon | 7.26e-08 | 3 |
future myelencephalon | 7.26e-08 | 3 |
epithelial sac | 7.31e-08 | 25 |
epithelium of foregut-midgut junction | 7.31e-08 | 25 |
anatomical boundary | 7.31e-08 | 25 |
hepatobiliary system | 7.31e-08 | 25 |
foregut-midgut junction | 7.31e-08 | 25 |
septum transversum | 7.31e-08 | 25 |
sac | 1.40e-07 | 26 |
endocrine system | 1.95e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.98e-41 | 2 |
adenocarcinoma | 8.61e-08 | 25 |