FFCP PHASE1:Hg19::chr17:6374648..6374688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:6374648..6374688,- | |||
|description=CAGE_peak_at_chr17:6374648..6374688,- | |description=CAGE_peak_at_chr17:6374648..6374688,- | ||
|id=chr17:6374648..6374688,- | |id=chr17:6374648..6374688,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002174;4.06e-26;1!CL:0000501;4.06e-26;1!CL:0000243;6.01e-14;15!CL:0000125;6.01e-14;15!CL:0000095;1.48e-12;17!CL:0000174;1.24e-09;3!CL:0002319;4.94e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,3.58e-26,1;CL:0000501,3.58e-26,1;CL:0000243,6.14e-14,15;CL:0000125,6.14e-14,15;CL:0000030,6.14e-14,15;CL:0000339,6.14e-14,15;CL:0000095,1.51e-12,17;CL:0000123,1.51e-12,17;CL:0000174,1.19e-09,3;CL:0002319,5.01e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.92e-21;10!CL:0000339;6.01e-14;15!UBERON:0003056;1.60e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.93e-19;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.00e-19,11 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.50e-10!86;UBERON:0001017!1.30e-09!82;UBERON:0002619!2.32e-09!22;UBERON:0001905!2.41e-09!2;UBERON:0002757!2.41e-09!2;UBERON:0010134!2.41e-09!2;UBERON:0002784!2.41e-09!2;UBERON:0005408!2.41e-09!2;UBERON:0001899!2.41e-09!2;UBERON:0000955!3.47e-09!69;UBERON:0006238!3.47e-09!69;UBERON:0000073!5.44e-09!94;UBERON:0001016!5.44e-09!94;UBERON:0000956!3.89e-08!25;UBERON:0000203!3.89e-08!25;UBERON:0001950!4.97e-08!20;UBERON:0007023!1.41e-07!115;UBERON:0002075!1.70e-07!18;UBERON:0002780!2.54e-07!41;UBERON:0001890!2.54e-07!41;UBERON:0006240!2.54e-07!41;UBERON:0003080!4.14e-07!42;UBERON:0000033!6.04e-07!123 | |ontology_enrichment_uberon=UBERON:0005743!2.50e-10!86;UBERON:0001017!1.30e-09!82;UBERON:0002619!2.32e-09!22;UBERON:0001905!2.41e-09!2;UBERON:0002757!2.41e-09!2;UBERON:0010134!2.41e-09!2;UBERON:0002784!2.41e-09!2;UBERON:0005408!2.41e-09!2;UBERON:0001899!2.41e-09!2;UBERON:0000955!3.47e-09!69;UBERON:0006238!3.47e-09!69;UBERON:0000073!5.44e-09!94;UBERON:0001016!5.44e-09!94;UBERON:0000956!3.89e-08!25;UBERON:0000203!3.89e-08!25;UBERON:0001950!4.97e-08!20;UBERON:0007023!1.41e-07!115;UBERON:0002075!1.70e-07!18;UBERON:0002780!2.54e-07!41;UBERON:0001890!2.54e-07!41;UBERON:0006240!2.54e-07!41;UBERON:0003080!4.14e-07!42;UBERON:0000033!6.04e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.29e-13;2!UBERON:0002757;1.29e-13;2!UBERON:0010134;1.29e-13;2!UBERON:0005408;1.29e-13;2!UBERON:0001899;1.29e-13;2!UBERON:0001264;8.06e-11;10!UBERON:0003296;1.86e-07;4!UBERON:0010133;1.86e-07;4!UBERON:0002784;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.55e-13,2;UBERON:0002757,1.55e-13,2;UBERON:0010134,1.55e-13,2;UBERON:0005408,1.55e-13,2;UBERON:0001899,1.55e-13,2;UBERON:0001264,7.30e-11,10;UBERON:0003296,2.04e-07,4;UBERON:0010133,2.04e-07,4;UBERON:0002784,2.04e-07,4 | |||
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| ||
|short_description=p@chr17:6374648..6374688,- | |short_description=p@chr17:6374648..6374688,- | ||
}} | }} |
Latest revision as of 20:00, 25 July 2015
Short description: | p@chr17:6374648..6374688, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:6374648..6374688, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 3.58e-26 | 1 |
granulosa cell | 3.58e-26 | 1 |
glial cell (sensu Vertebrata) | 6.14e-14 | 15 |
glial cell | 6.14e-14 | 15 |
glioblast | 6.14e-14 | 15 |
glioblast (sensu Vertebrata) | 6.14e-14 | 15 |
neuron associated cell | 1.51e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 1.51e-12 | 17 |
steroid hormone secreting cell | 1.19e-09 | 3 |
neural cell | 5.01e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.55e-13 | 2 |
regional part of epithalamus | 1.55e-13 | 2 |
secretory circumventricular organ | 1.55e-13 | 2 |
circumventricular organ | 1.55e-13 | 2 |
epithalamus | 1.55e-13 | 2 |
pancreas | 7.30e-11 | 10 |
gland of diencephalon | 2.04e-07 | 4 |
neuroendocrine gland | 2.04e-07 | 4 |
regional part of diencephalon | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.00e-19 | 11 |