FFCP PHASE1:Hg19::chr17:70614580..70614613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:70614580..70614613,- | |||
|description=CAGE_peak_at_chr17:70614580..70614613,- | |description=CAGE_peak_at_chr17:70614580..70614613,- | ||
|id=chr17:70614580..70614613,- | |id=chr17:70614580..70614613,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;7.05e-18;2!CL:0002178;1.85e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,6.48e-18,2;CL:0002178,1.85e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.23e-08!143;DOID:3119!1.20e-07!14;DOID:3493!1.55e-07!2;DOID:1909!3.66e-07!2;DOID:4929!7.69e-07!2 | |ontology_enrichment_disease=DOID:0050687!3.23e-08!143;DOID:3119!1.20e-07!14;DOID:3493!1.55e-07!2;DOID:1909!3.66e-07!2;DOID:4929!7.69e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3119;5.79e-22;14!DOID:3493;5.48e-18;2!DOID:4362;5.92e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,6.21e-22,14;DOID:3493,5.48e-18,2;DOID:305,3.10e-08,106;DOID:4362,5.73e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0005409!9.09e-08!35;UBERON:0004921!1.48e-07!129;UBERON:0004185!1.48e-07!129;UBERON:0000160!6.35e-07!27;UBERON:0002294!8.43e-07!7;UBERON:0001173!8.43e-07!7;UBERON:0004912!8.43e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;7.05e-18;2!UBERON:0004801;7.05e-18;2!UBERON:0000945;5.35e-08;5!UBERON:0010039;5.35e-08;5!UBERON:0000002;7.80e-07;6!UBERON:0001560;7.80e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,6.48e-18,2;UBERON:0004801,6.48e-18,2;UBERON:0000002,7.58e-07,6;UBERON:0001560,7.58e-07,6 | |||
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| ||
|short_description=p@chr17:70614580..70614613,- | |short_description=p@chr17:70614580..70614613,- | ||
}} | }} |
Latest revision as of 20:33, 25 July 2015
Short description: | p@chr17:70614580..70614613, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:70614580..70614613, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.48e-18 | 2 |
epithelial cell of stomach | 1.85e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 6.48e-18 | 2 |
cervix epithelium | 6.48e-18 | 2 |
uterine cervix | 7.58e-07 | 6 |
neck of organ | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 6.21e-22 | 14 |
signet ring cell adenocarcinoma | 5.48e-18 | 2 |
carcinoma | 3.10e-08 | 106 |
cervical cancer | 5.73e-08 | 5 |