FFCP PHASE1:Hg19::chr17:77925806..77925817,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:77925806..77925817,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr17:77925806..77925817,- | |||
|id=chr17:77925806..77925817,- | |||
|ontology_enrichment_celltype=CL:0000148!1.83e-22!10;CL:0000541!1.83e-22!10;CL:0000147!1.82e-15!14;CL:0000710!3.12e-10!20;CL:0002567!5.70e-10!3;CL:0000333!2.28e-09!41;CL:0000133!7.62e-09!59;CL:0002322!1.54e-08!5;CL:0000075!4.31e-07!27;CL:0000221!9.82e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.40e-71;10!CL:0002567;1.99e-60;3!CL:0000147;4.85e-51;14!CL:0000710;8.65e-36;20!CL:0000075;1.52e-26;27!CL:0002566;3.45e-21;1!CL:0002077;6.32e-18;34!CL:0002178;8.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.40e-71,10;CL:0000541,2.40e-71,10;CL:0002567,1.99e-60,3;CL:0000147,4.85e-51,14;CL:0000710,8.65e-36,20;CL:0000075,1.52e-26,27;CL:0002566,3.45e-21,1;CL:0002077,4.28e-21,34;CL:0000333,1.10e-16,41;CL:0000133,9.51e-12,59;CL:0000221,1.15e-09,72;CL:0002178,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000133;1.72e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!4.48e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.49e-40;2!DOID:3493;4.30e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.49e-40,2;DOID:3493,4.09e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,8.0007346808133,17.5714675756808,42.1982809956169,13.6857956818164,7.81488944545259,0.901029173531752,21.4369824472934,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.393709926058995,0,0,0,0.160753148465019,0,0.83088067605837,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0,0,0,0,3.03298235083296,3.14011866899464,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96300467230486,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0.135982980381829,0,0,0,0,0,0,0,0,0.407955318967927,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr17:77925806..77925817,- | |||
}} |
Latest revision as of 22:26, 25 July 2015
Short description: | p@chr17:77925806..77925817, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77925806..77925817, - |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.40e-71 | 10 |
melanoblast | 2.40e-71 | 10 |
light melanocyte | 1.99e-60 | 3 |
pigment cell | 4.85e-51 | 14 |
neurecto-epithelial cell | 8.65e-36 | 20 |
columnar/cuboidal epithelial cell | 1.52e-26 | 27 |
dark melanocyte | 3.45e-21 | 1 |
ecto-epithelial cell | 4.28e-21 | 34 |
migratory neural crest cell | 1.10e-16 | 41 |
neurectodermal cell | 9.51e-12 | 59 |
ectodermal cell | 1.15e-09 | 72 |
epithelial cell of stomach | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.49e-40 | 2 |
signet ring cell adenocarcinoma | 4.09e-11 | 2 |