FFCP PHASE1:Hg19::chr17:78808278..78808309,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:78808278..78808309,-
|short_description=p@chr17:78808278..78808309,-
|description=CAGE_peak_at_chr17:78808278..78808309,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:78808278..78808309,- | |||
|coexpression_cluster_id=C1013 | |||
|description=CAGE_peak_at_chr17:78808278..78808309,- | |||
|id=chr17:78808278..78808309,- | |||
|ontology_enrichment_celltype=CL:0000057!8.98e-25!75;CL:0002620!1.46e-18!23;CL:0000055!1.42e-17!180;CL:0002570!5.38e-09!8;CL:0002551!1.76e-07!6;CL:0002556!3.03e-07!6;CL:0002334!7.60e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.44e-27;23!CL:0000057;5.07e-17;73!CL:0002551;1.75e-15;6!CL:0002570;3.41e-15;8!CL:0002556;6.61e-15;6!CL:0002552;5.78e-13;5!CL:0002582;1.65e-09;3!CL:0002334;8.87e-08;12!CL:0002363;8.88e-07;2!CL:0002583;9.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.75e-34,76;CL:0002620,1.23e-27,23;CL:0002551,1.54e-15,6;CL:0002570,3.40e-15,8;CL:0002556,5.54e-15,6;CL:0002552,7.12e-13,5;CL:0002582,1.66e-09,3;CL:0000134,4.12e-09,354;CL:0002320,1.12e-08,361;CL:0000048,2.80e-08,427;CL:0000723,5.78e-08,433;CL:0002334,9.64e-08,12;CL:0000219,1.20e-07,386;CL:0000034,1.47e-07,441;CL:0002363,8.91e-07,2;CL:0000008,8.91e-07,2;CL:0002583,9.41e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;8.88e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.28e-16!95;UBERON:0000475!1.56e-14!365;UBERON:0002616!3.44e-13!59;UBERON:0002199!1.38e-12!45;UBERON:0002416!1.38e-12!45;UBERON:0000033!3.97e-12!123;UBERON:0002780!1.06e-11!41;UBERON:0001890!1.06e-11!41;UBERON:0006240!1.06e-11!41;UBERON:0001049!2.14e-11!57;UBERON:0005068!2.14e-11!57;UBERON:0006241!2.14e-11!57;UBERON:0007135!2.14e-11!57;UBERON:0000955!2.18e-11!69;UBERON:0006238!2.18e-11!69;UBERON:0002097!2.36e-11!40;UBERON:0000153!2.61e-11!129;UBERON:0007811!2.61e-11!129;UBERON:0003080!3.31e-11!42;UBERON:0001017!9.68e-11!82;UBERON:0000073!2.28e-10!94;UBERON:0001016!2.28e-10!94;UBERON:0005743!3.87e-10!86;UBERON:0003056!2.29e-09!61;UBERON:0004121!2.40e-09!169;UBERON:0000914!4.67e-09!83;UBERON:0002329!4.67e-09!83;UBERON:0003077!4.67e-09!83;UBERON:0003059!4.67e-09!83;UBERON:0007282!4.67e-09!83;UBERON:0009618!4.67e-09!83;UBERON:0007285!4.67e-09!83;UBERON:0007023!5.58e-09!115;UBERON:0000924!1.06e-08!173;UBERON:0006601!1.06e-08!173;UBERON:0001013!3.92e-08!14;UBERON:0003075!4.44e-08!86;UBERON:0007284!4.44e-08!86;UBERON:0001893!4.69e-08!34;UBERON:0002020!5.59e-08!34;UBERON:0003528!5.59e-08!34;UBERON:0002067!8.83e-08!9;UBERON:0004016!8.83e-08!9;UBERON:0010083!8.83e-08!9;UBERON:0002791!1.34e-07!33;UBERON:0001758!3.03e-07!6;UBERON:0003672!3.03e-07!6;UBERON:0002346!3.21e-07!90;UBERON:0001869!6.21e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;6.61e-15;6!UBERON:0003672;6.61e-15;6!UBERON:0003102;7.32e-15;50!UBERON:0002199;3.07e-14;46!UBERON:0002416;3.07e-14;46!UBERON:0002067;1.09e-13;9!UBERON:0002097;1.61e-13;41!UBERON:0001013;3.07e-13;14!UBERON:0003129;1.15e-12;7!UBERON:0011137;1.78e-10;11!UBERON:0010323;1.78e-10;11!UBERON:0000165;1.00e-08;28!UBERON:0001828;6.13e-08;8!UBERON:0002384;1.53e-07;198!UBERON:0001444;2.64e-07;48!UBERON:0000075;7.48e-07;16!UBERON:0003566;8.88e-07;2!UBERON:0001777;8.88e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.78e-32,99;UBERON:0002199,5.73e-23,46;UBERON:0002416,5.73e-23,46;UBERON:0002097,2.51e-19,41;UBERON:0001758,5.54e-15,6;UBERON:0003672,5.54e-15,6;UBERON:0002067,1.01e-13,9;UBERON:0004016,1.01e-13,9;UBERON:0010083,1.01e-13,9;UBERON:0001013,3.50e-13,14;UBERON:0003129,9.92e-13,7;UBERON:0010323,1.86e-10,11;UBERON:0000165,5.47e-10,29;UBERON:0000930,5.47e-10,29;UBERON:0001444,1.84e-09,49;UBERON:0010314,5.35e-09,132;UBERON:0002384,1.16e-08,371;UBERON:0011137,5.65e-08,14;UBERON:0001828,6.94e-08,8;UBERON:0000033,8.45e-08,56;UBERON:0000075,7.70e-07,16;UBERON:0003566,8.91e-07,2;UBERON:0001777,8.91e-07,2 | |||
|phase1_expression=1.45342703416445,0.856402095563933,0,0,0,0.872338524100369,0,1.26343974685366,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0.492484232307152,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0.449446968890169,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0.709336764396714,0,0,0,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0.234321431833797,2.80944069147288,5.70471821544449,2.39117888882882,2.11382097558777,3.56120477609889,2.80901613404497,3.0623125688234,6.1417158655884,2.58314452939414,2.37600571456411,1.23633464639278,0,0,8.24846958374924,1.25118519871964,2.77064115484183,2.19488810440419,3.67785354958824,1.80285670687916,0,1.61450672119976,0.213557388818567,0.847727604638247,2.70081986475962,2.47326070172253,0.515281080091258,0.744467425326359,1.35021065793013,0.389748020644795,3.28163906517349,1.38074847963449,1.13152239773168,2.4850671476163,2.51880245569101,1.52604533079439,0,0,0,0,0,0,0,0,0,0,0.643240938192885,4.14404764057442,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,7.49359102213747,7.27954349695705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.308482478109971,0,0,0.560655421726804,0.43596006883328,0.1466765716419,0.258543431515556,3.57656445851882,0.845302752556,4.25500986535793,3.12022310734098,0,0,0.532844358032199,0.285955987316295,1.08524321078289,0,1.95441710576241,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0.254094624222463,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.788512075169673,0.234282829985426,0,0,1.03473071292505,0.664225598535437,0,6.0818530127658,0,0,0,0,0,0,1.66435439510497,0.30239029332968,1.24053903909388,0.153461973288062,0.280660094433074,0.256278298511402,0,0.321707842287215,0,8.94416224055402,5.14929003408069,11.3335475299057,17.6546505922431,12.2020897382957,0,0,0,1.03333003348146,2.54927635209404,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,3.86682873168488,0.154048617114644,0,0.551346289938122,0.429680979473094,0.145016693914229,0.511359764496605,0.534192213880424,0,0,0,0,0.929691098594572,0.62962469366128,0,0,0,0,0,0,0.744316738719335,0,0,0.255897791311334,0,1.59101623962968,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,2.45699840534374,0.707027159768564,0,1.10273068709225,0,0,0,0.655894752046633,0,0,0.281695602532241,0.430234056612155,0,0,2.12856638442359,0,0,3.79473173765715,1.39973888097993,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0.986434056369336,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0,0.438770794307945,0,0,0.384751292518985,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.943615861729479,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,2.87501295673185,0,0.859530882839914,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0.681017030557878,0.160753148465019,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0.517131825446202,0.66116300871345,0,0,0.320362237703084,2.20086027139532,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,1.752673029891,0.573409195690071,0.332787154610557,0.248385611765534,0.553394539744923,0,0,0,0,0,0,2.38807684618998,2.33713309847224,2.21922344601045,0.378806010550178,0.754703705257725,0.889811221596536,2.97492088916001,0.756154618816195,2.02068360757615,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0.797525143673985,0.521745061811734,0,0,1.22061219961398,0.727394636810238,0.214821114084977,0.928067519756987,0.398095888698616,0,4.46414416737631,3.03074539889327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,55.0476791253004,0,0,0,1.07824811396682,0,0,0,0,0,0,0.954013051960256,0,0,2.1160556621441,0,0.449604575675217,0,2.87340946302872,0.205116364240755,0.252071696221718,0.553258019713743,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,1.56215619722769,0.206686796501184,0.570742291745161,0,0,0.496211178389294,0,0,1.60710550763486,0.336283722218824,1.21393120847326,0.455324382702595,0,0,0,0.0679697329768317,0.328863867814245,0,0,0.627944742804112,0,0,0.913158720509496,0,0,0.071476544176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| ||
|short_description=p@chr17:78808278..78808309,- | |||
}} | }} |
Latest revision as of 22:33, 25 July 2015
Short description: | p@chr17:78808278..78808309, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:78808278..78808309, - |
Coexpression cluster: | C1013_myxofibrosarcoma_CD14_Preadipocyte_large_bone_Fibroblast_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.75e-34 | 76 |
skin fibroblast | 1.23e-27 | 23 |
fibroblast of dermis | 1.54e-15 | 6 |
mesenchymal stem cell of adipose | 3.40e-15 | 8 |
fibroblast of periodontium | 5.54e-15 | 6 |
fibroblast of gingiva | 7.12e-13 | 5 |
visceral preadipocyte | 1.66e-09 | 3 |
mesenchymal cell | 4.12e-09 | 354 |
connective tissue cell | 1.12e-08 | 361 |
multi fate stem cell | 2.80e-08 | 427 |
somatic stem cell | 5.78e-08 | 433 |
preadipocyte | 9.64e-08 | 12 |
motile cell | 1.20e-07 | 386 |
stem cell | 1.47e-07 | 441 |
keratocyte | 8.91e-07 | 2 |
migratory cranial neural crest cell | 8.91e-07 | 2 |
subcutaneous preadipocyte | 9.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.78e-32 | 99 |
integument | 5.73e-23 | 46 |
integumental system | 5.73e-23 | 46 |
skin of body | 2.51e-19 | 41 |
periodontium | 5.54e-15 | 6 |
dentition | 5.54e-15 | 6 |
dermis | 1.01e-13 | 9 |
dermatome | 1.01e-13 | 9 |
future dermis | 1.01e-13 | 9 |
adipose tissue | 3.50e-13 | 14 |
skull | 9.92e-13 | 7 |
cranial skeletal system | 1.86e-10 | 11 |
mouth | 5.47e-10 | 29 |
stomodeum | 5.47e-10 | 29 |
subdivision of head | 1.84e-09 | 49 |
structure with developmental contribution from neural crest | 5.35e-09 | 132 |
connective tissue | 1.16e-08 | 371 |
axial skeletal system | 5.65e-08 | 14 |
gingiva | 6.94e-08 | 8 |
head | 8.45e-08 | 56 |
subdivision of skeletal system | 7.70e-07 | 16 |
head connective tissue | 8.91e-07 | 2 |
substantia propria of cornea | 8.91e-07 | 2 |