FFCP PHASE1:Hg19::chr17:78808278..78808309,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:78808278..78808309,- | |||
|coexpression_cluster_id=C1013 | |coexpression_cluster_id=C1013 | ||
|description=CAGE_peak_at_chr17:78808278..78808309,- | |description=CAGE_peak_at_chr17:78808278..78808309,- | ||
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|ontology_enrichment_celltype=CL:0000057!8.98e-25!75;CL:0002620!1.46e-18!23;CL:0000055!1.42e-17!180;CL:0002570!5.38e-09!8;CL:0002551!1.76e-07!6;CL:0002556!3.03e-07!6;CL:0002334!7.60e-07!12 | |ontology_enrichment_celltype=CL:0000057!8.98e-25!75;CL:0002620!1.46e-18!23;CL:0000055!1.42e-17!180;CL:0002570!5.38e-09!8;CL:0002551!1.76e-07!6;CL:0002556!3.03e-07!6;CL:0002334!7.60e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.44e-27;23!CL:0000057;5.07e-17;73!CL:0002551;1.75e-15;6!CL:0002570;3.41e-15;8!CL:0002556;6.61e-15;6!CL:0002552;5.78e-13;5!CL:0002582;1.65e-09;3!CL:0002334;8.87e-08;12!CL:0002363;8.88e-07;2!CL:0002583;9.38e-07;2 | |ontology_enrichment_celltype_v019=CL:0002620;1.44e-27;23!CL:0000057;5.07e-17;73!CL:0002551;1.75e-15;6!CL:0002570;3.41e-15;8!CL:0002556;6.61e-15;6!CL:0002552;5.78e-13;5!CL:0002582;1.65e-09;3!CL:0002334;8.87e-08;12!CL:0002363;8.88e-07;2!CL:0002583;9.38e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.75e-34,76;CL:0002620,1.23e-27,23;CL:0002551,1.54e-15,6;CL:0002570,3.40e-15,8;CL:0002556,5.54e-15,6;CL:0002552,7.12e-13,5;CL:0002582,1.66e-09,3;CL:0000134,4.12e-09,354;CL:0002320,1.12e-08,361;CL:0000048,2.80e-08,427;CL:0000723,5.78e-08,433;CL:0002334,9.64e-08,12;CL:0000219,1.20e-07,386;CL:0000034,1.47e-07,441;CL:0002363,8.91e-07,2;CL:0000008,8.91e-07,2;CL:0002583,9.41e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;8.88e-07;2 | |ontology_enrichment_development_v019=CL:0000008;8.88e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001758;6.61e-15;6!UBERON:0003672;6.61e-15;6!UBERON:0003102;7.32e-15;50!UBERON:0002199;3.07e-14;46!UBERON:0002416;3.07e-14;46!UBERON:0002067;1.09e-13;9!UBERON:0002097;1.61e-13;41!UBERON:0001013;3.07e-13;14!UBERON:0003129;1.15e-12;7!UBERON:0011137;1.78e-10;11!UBERON:0010323;1.78e-10;11!UBERON:0000165;1.00e-08;28!UBERON:0001828;6.13e-08;8!UBERON:0002384;1.53e-07;198!UBERON:0001444;2.64e-07;48!UBERON:0000075;7.48e-07;16!UBERON:0003566;8.88e-07;2!UBERON:0001777;8.88e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001758;6.61e-15;6!UBERON:0003672;6.61e-15;6!UBERON:0003102;7.32e-15;50!UBERON:0002199;3.07e-14;46!UBERON:0002416;3.07e-14;46!UBERON:0002067;1.09e-13;9!UBERON:0002097;1.61e-13;41!UBERON:0001013;3.07e-13;14!UBERON:0003129;1.15e-12;7!UBERON:0011137;1.78e-10;11!UBERON:0010323;1.78e-10;11!UBERON:0000165;1.00e-08;28!UBERON:0001828;6.13e-08;8!UBERON:0002384;1.53e-07;198!UBERON:0001444;2.64e-07;48!UBERON:0000075;7.48e-07;16!UBERON:0003566;8.88e-07;2!UBERON:0001777;8.88e-07;2 | ||
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| ||
|short_description=p@chr17:78808278..78808309,- | |short_description=p@chr17:78808278..78808309,- | ||
}} | }} |
Latest revision as of 22:33, 25 July 2015
Short description: | p@chr17:78808278..78808309, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:78808278..78808309, - |
Coexpression cluster: | C1013_myxofibrosarcoma_CD14_Preadipocyte_large_bone_Fibroblast_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.75e-34 | 76 |
skin fibroblast | 1.23e-27 | 23 |
fibroblast of dermis | 1.54e-15 | 6 |
mesenchymal stem cell of adipose | 3.40e-15 | 8 |
fibroblast of periodontium | 5.54e-15 | 6 |
fibroblast of gingiva | 7.12e-13 | 5 |
visceral preadipocyte | 1.66e-09 | 3 |
mesenchymal cell | 4.12e-09 | 354 |
connective tissue cell | 1.12e-08 | 361 |
multi fate stem cell | 2.80e-08 | 427 |
somatic stem cell | 5.78e-08 | 433 |
preadipocyte | 9.64e-08 | 12 |
motile cell | 1.20e-07 | 386 |
stem cell | 1.47e-07 | 441 |
keratocyte | 8.91e-07 | 2 |
migratory cranial neural crest cell | 8.91e-07 | 2 |
subcutaneous preadipocyte | 9.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.78e-32 | 99 |
integument | 5.73e-23 | 46 |
integumental system | 5.73e-23 | 46 |
skin of body | 2.51e-19 | 41 |
periodontium | 5.54e-15 | 6 |
dentition | 5.54e-15 | 6 |
dermis | 1.01e-13 | 9 |
dermatome | 1.01e-13 | 9 |
future dermis | 1.01e-13 | 9 |
adipose tissue | 3.50e-13 | 14 |
skull | 9.92e-13 | 7 |
cranial skeletal system | 1.86e-10 | 11 |
mouth | 5.47e-10 | 29 |
stomodeum | 5.47e-10 | 29 |
subdivision of head | 1.84e-09 | 49 |
structure with developmental contribution from neural crest | 5.35e-09 | 132 |
connective tissue | 1.16e-08 | 371 |
axial skeletal system | 5.65e-08 | 14 |
gingiva | 6.94e-08 | 8 |
head | 8.45e-08 | 56 |
subdivision of skeletal system | 7.70e-07 | 16 |
head connective tissue | 8.91e-07 | 2 |
substantia propria of cornea | 8.91e-07 | 2 |