FFCP PHASE1:Hg19::chr18:108531..108547,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:108531..108547,+ | |||
|coexpression_cluster_id=C444 | |coexpression_cluster_id=C444 | ||
|description=CAGE_peak_at_chr18:108531..108547,+ | |description=CAGE_peak_at_chr18:108531..108547,+ | ||
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|ontology_enrichment_celltype=CL:0002274!2.00e-15!5;CL:0000457!2.00e-15!5;CL:0002191!2.00e-15!5;CL:0000097!2.00e-15!5;CL:0000831!2.00e-15!5;CL:0002028!2.00e-15!5;CL:0000163!2.13e-08!9;CL:0002583!1.63e-07!2;CL:0002327!1.79e-07!4 | |ontology_enrichment_celltype=CL:0002274!2.00e-15!5;CL:0000457!2.00e-15!5;CL:0002191!2.00e-15!5;CL:0000097!2.00e-15!5;CL:0000831!2.00e-15!5;CL:0002028!2.00e-15!5;CL:0000163!2.13e-08!9;CL:0002583!1.63e-07!2;CL:0002327!1.79e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002591;6.93e-16;1!CL:0002327;5.63e-15;4!CL:0000097;2.00e-12;5!CL:0002551;1.77e-10;6!CL:0002583;2.48e-08;2!CL:0000163;2.68e-07;9 | |ontology_enrichment_celltype_v019=CL:0002591;6.93e-16;1!CL:0002327;5.63e-15;4!CL:0000097;2.00e-12;5!CL:0002551;1.77e-10;6!CL:0002583;2.48e-08;2!CL:0000163;2.68e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.46e-16,1;CL:0002327,5.24e-15,4;CL:0000097,2.12e-12,5;CL:0002028,2.12e-12,5;CL:0002551,1.50e-10,6;CL:0002583,2.48e-08,2;CL:0000163,2.77e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3451!4.66e-07!2;DOID:4159!4.66e-07!2;DOID:0060122!4.66e-07!2;DOID:154!7.76e-07!2;DOID:4236!7.76e-07!2 | |ontology_enrichment_disease=DOID:3451!4.66e-07!2;DOID:4159!4.66e-07!2;DOID:0060122!4.66e-07!2;DOID:154!7.76e-07!2;DOID:4236!7.76e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.43e-11!57;UBERON:0005068!1.43e-11!57;UBERON:0006241!1.43e-11!57;UBERON:0007135!1.43e-11!57;UBERON:0002020!3.99e-09!34;UBERON:0003528!3.99e-09!34;UBERON:0002346!1.04e-08!90;UBERON:0002616!2.28e-08!59;UBERON:0002308!7.07e-08!9;UBERON:0000125!7.07e-08!9;UBERON:0001911!1.79e-07!4;UBERON:0005333!1.79e-07!4;UBERON:0008425!1.79e-07!4;UBERON:0005311!1.79e-07!4;UBERON:0003075!2.41e-07!86;UBERON:0007284!2.41e-07!86;UBERON:0002780!2.59e-07!41;UBERON:0001890!2.59e-07!41;UBERON:0006240!2.59e-07!41;UBERON:0003080!4.37e-07!42;UBERON:0001954!6.49e-07!2;UBERON:0003022!6.49e-07!2;UBERON:0002421!6.49e-07!2;UBERON:0002600!6.49e-07!2;UBERON:0001869!8.50e-07!32;UBERON:0001017!9.96e-07!82 | |ontology_enrichment_uberon=UBERON:0001049!1.43e-11!57;UBERON:0005068!1.43e-11!57;UBERON:0006241!1.43e-11!57;UBERON:0007135!1.43e-11!57;UBERON:0002020!3.99e-09!34;UBERON:0003528!3.99e-09!34;UBERON:0002346!1.04e-08!90;UBERON:0002616!2.28e-08!59;UBERON:0002308!7.07e-08!9;UBERON:0000125!7.07e-08!9;UBERON:0001911!1.79e-07!4;UBERON:0005333!1.79e-07!4;UBERON:0008425!1.79e-07!4;UBERON:0005311!1.79e-07!4;UBERON:0003075!2.41e-07!86;UBERON:0007284!2.41e-07!86;UBERON:0002780!2.59e-07!41;UBERON:0001890!2.59e-07!41;UBERON:0006240!2.59e-07!41;UBERON:0003080!4.37e-07!42;UBERON:0001954!6.49e-07!2;UBERON:0003022!6.49e-07!2;UBERON:0002421!6.49e-07!2;UBERON:0002600!6.49e-07!2;UBERON:0001869!8.50e-07!32;UBERON:0001017!9.96e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;5.63e-15;4!UBERON:0000078;1.34e-08;2!UBERON:0002012;1.34e-08;2!UBERON:0008886;1.34e-08;2!UBERON:0001905;2.48e-08;2!UBERON:0002757;2.48e-08;2!UBERON:0010134;2.48e-08;2!UBERON:0005408;2.48e-08;2!UBERON:0001899;2.48e-08;2!UBERON:0002067;2.81e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001911;5.63e-15;4!UBERON:0000078;1.34e-08;2!UBERON:0002012;1.34e-08;2!UBERON:0008886;1.34e-08;2!UBERON:0001905;2.48e-08;2!UBERON:0002757;2.48e-08;2!UBERON:0010134;2.48e-08;2!UBERON:0005408;2.48e-08;2!UBERON:0001899;2.48e-08;2!UBERON:0002067;2.81e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.24e-15,4;UBERON:0005333,5.24e-15,4;UBERON:0008425,5.24e-15,4;UBERON:0005311,5.24e-15,4;UBERON:0000078,1.39e-08,2;UBERON:0007497,1.39e-08,2;UBERON:0003643,1.39e-08,2;UBERON:0003504,1.39e-08,2;UBERON:0003469,1.39e-08,2;UBERON:0003496,1.39e-08,2;UBERON:0002012,1.39e-08,2;UBERON:0008886,1.39e-08,2;UBERON:0007303,1.39e-08,2;UBERON:0002061,1.39e-08,2;UBERON:0005432,1.39e-08,2;UBERON:0004363,1.39e-08,2;UBERON:0001905,2.87e-08,2;UBERON:0002757,2.87e-08,2;UBERON:0010134,2.87e-08,2;UBERON:0005408,2.87e-08,2;UBERON:0001899,2.87e-08,2;UBERON:0000076,5.76e-08,8;UBERON:0002067,2.52e-07,9;UBERON:0004016,2.52e-07,9;UBERON:0010083,2.52e-07,9 | |||
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| ||
|short_description=p@chr18:108531..108547,+ | |short_description=p@chr18:108531..108547,+ | ||
}} | }} |
Latest revision as of 23:34, 25 July 2015
Short description: | p@chr18:108531..108547, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:108531..108547, + |
Coexpression cluster: | C444_CD14_trachea_tonsil_tongue_throat_salivary_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.46e-16 | 1 |
mammary gland epithelial cell | 5.24e-15 | 4 |
mast cell | 2.12e-12 | 5 |
basophil mast progenitor cell | 2.12e-12 | 5 |
fibroblast of dermis | 1.50e-10 | 6 |
subcutaneous preadipocyte | 2.48e-08 | 2 |
endocrine cell | 2.77e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.24e-15 | 4 |
mammary bud | 5.24e-15 | 4 |
mammary ridge | 5.24e-15 | 4 |
mammary placode | 5.24e-15 | 4 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.39e-08 | 2 |
developing epithelial placode | 1.39e-08 | 2 |
respiratory system arterial blood vessel | 1.39e-08 | 2 |
respiratory system blood vessel | 1.39e-08 | 2 |
respiratory system artery | 1.39e-08 | 2 |
head blood vessel | 1.39e-08 | 2 |
pulmonary artery | 1.39e-08 | 2 |
pulmonary vascular system | 1.39e-08 | 2 |
pharyngeal vasculature | 1.39e-08 | 2 |
truncus arteriosus | 1.39e-08 | 2 |
aortic sac | 1.39e-08 | 2 |
pharyngeal arch artery | 1.39e-08 | 2 |
pineal body | 2.87e-08 | 2 |
regional part of epithalamus | 2.87e-08 | 2 |
secretory circumventricular organ | 2.87e-08 | 2 |
circumventricular organ | 2.87e-08 | 2 |
epithalamus | 2.87e-08 | 2 |
external ectoderm | 5.76e-08 | 8 |
dermis | 2.52e-07 | 9 |
dermatome | 2.52e-07 | 9 |
future dermis | 2.52e-07 | 9 |