FFCP PHASE1:Hg19::chr18:20407272..20407304,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:20407272..20407304,- | |||
|coexpression_cluster_id=C439 | |||
|description=CAGE_peak_at_chr18:20407272..20407304,- | |description=CAGE_peak_at_chr18:20407272..20407304,- | ||
|id=chr18:20407272..20407304,- | |id=chr18:20407272..20407304,- | ||
|ontology_enrichment_celltype=CL:0002159!4.46e-14!13;CL:0002621!2.32e-10!3;CL:0002166!2.79e-10!3;CL:0002076!4.75e-10!43;CL:0000066!5.88e-08!254;CL:0000223!1.50e-07!59;CL:0000317!1.91e-07!2;CL:1000448!1.91e-07!2;CL:0002308!1.91e-07!2;CL:0002140!1.91e-07!2;CL:0000575!6.49e-07!2 | |ontology_enrichment_celltype=CL:0002159!4.46e-14!13;CL:0002621!2.32e-10!3;CL:0002166!2.79e-10!3;CL:0002076!4.75e-10!43;CL:0000066!5.88e-08!254;CL:0000223!1.50e-07!59;CL:0000317!1.91e-07!2;CL:1000448!1.91e-07!2;CL:0002308!1.91e-07!2;CL:0002140!1.91e-07!2;CL:0000575!6.49e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000317;2.85e-10;2!CL:1000448;2.85e-10;2!CL:0002308;2.85e-10;2!CL:0002097;2.85e-10;2!CL:0002140;2.85e-10;2!CL:0000077;3.10e-09;19!CL:0000150;6.61e-09;9!CL:0002166;2.19e-07;3!CL:0002621;2.19e-07;3!CL:0000174;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.72e-10,2;CL:1000448,2.72e-10,2;CL:0002308,2.72e-10,2;CL:0002140,2.72e-10,2;CL:0002097,3.27e-10,2;CL:0000077,3.24e-09,19;CL:0000150,6.88e-09,9;CL:0002166,2.05e-07,3;CL:0002621,2.32e-07,3;CL:0000174,3.16e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.24e-07!14 | |ontology_enrichment_disease=DOID:2394!4.24e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!2.32e-10!3;UBERON:0001708!8.53e-08!4;UBERON:0001704!8.53e-08!4;UBERON:0002419!1.91e-07!2;UBERON:0007771!1.91e-07!2;UBERON:0003297!1.91e-07!2;UBERON:0001821!1.91e-07!2;UBERON:0003487!1.91e-07!2;UBERON:0001820!1.91e-07!2;UBERON:0005089!1.91e-07!2;UBERON:0005088!1.91e-07!2 | |ontology_enrichment_uberon=UBERON:0001949!2.32e-10!3;UBERON:0001708!8.53e-08!4;UBERON:0001704!8.53e-08!4;UBERON:0002419!1.91e-07!2;UBERON:0007771!1.91e-07!2;UBERON:0003297!1.91e-07!2;UBERON:0001821!1.91e-07!2;UBERON:0003487!1.91e-07!2;UBERON:0001820!1.91e-07!2;UBERON:0005089!1.91e-07!2;UBERON:0005088!1.91e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.85e-10;2!UBERON:0007771;2.85e-10;2!UBERON:0003297;2.85e-10;2!UBERON:0001821;2.85e-10;2!UBERON:0003487;2.85e-10;2!UBERON:0001820;2.85e-10;2!UBERON:0001949;2.19e-07;3!UBERON:0002369;2.88e-07;3!UBERON:0001235;2.88e-07;3!UBERON:0006858;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.72e-10,2;UBERON:0007771,2.72e-10,2;UBERON:0003297,2.72e-10,2;UBERON:0001821,2.72e-10,2;UBERON:0003487,2.72e-10,2;UBERON:0001820,2.72e-10,2;UBERON:0005089,2.72e-10,2;UBERON:0005088,2.72e-10,2;UBERON:0001949,2.32e-07,3;UBERON:0002369,3.16e-07,3;UBERON:0001235,3.16e-07,3;UBERON:0006858,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929119112685311,0,0,0,0.344745680736619,1.29096936716765,1.35426486594342,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.671928512795438,0.425325291727159,0.985143749731331,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,0.871533458600294,3.69900067373611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,63.2049834350607,1.22896305723383,0.447352215784832,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0.295710299979268,0.318593534327405,0,0.155262956876259,0,0,0,0.901545653983311,1.52322084867518,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929119112685311,0,0,0,0.344745680736619,1.29096936716765,1.35426486594342,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.671928512795438,0.425325291727159,0.985143749731331,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,0.871533458600294,3.69900067373611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,63.2049834350607,1.22896305723383,0.447352215784832,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0.295710299979268,0.318593534327405,0,0.155262956876259,0,0,0,0.901545653983311,1.52322084867518,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:20407272..20407304,- | |short_description=p@chr18:20407272..20407304,- | ||
}} | }} |
Latest revision as of 23:55, 25 July 2015
Short description: | p@chr18:20407272..20407304, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:20407272..20407304, - |
Coexpression cluster: | C439_acute_CD14_Macrophage_biphenotypic_neuroblastoma_Monocytederived_myelodysplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.72e-10 | 2 |
epithelial cell of sweat gland | 2.72e-10 | 2 |
epithelial cell of skin gland | 2.72e-10 | 2 |
acinar cell of sebaceous gland | 2.72e-10 | 2 |
cortical cell of adrenal gland | 3.27e-10 | 2 |
mesothelial cell | 3.24e-09 | 19 |
glandular epithelial cell | 6.88e-09 | 9 |
epithelial cell of Malassez | 2.05e-07 | 3 |
gingival epithelial cell | 2.32e-07 | 3 |
steroid hormone secreting cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.72e-10 | 2 |
epidermis gland | 2.72e-10 | 2 |
gland of integumental system | 2.72e-10 | 2 |
sebaceous gland | 2.72e-10 | 2 |
skin sebaceous gland | 2.72e-10 | 2 |
sweat gland | 2.72e-10 | 2 |
sweat gland placode | 2.72e-10 | 2 |
sebaceous gland placode | 2.72e-10 | 2 |
gingival epithelium | 2.32e-07 | 3 |
adrenal gland | 3.16e-07 | 3 |
adrenal cortex | 3.16e-07 | 3 |
adrenal/interrenal gland | 3.16e-07 | 3 |