FFCP PHASE1:Hg19::chr18:21479408..21479415,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21479408..21479415,- | |||
|coexpression_cluster_id=C363 | |coexpression_cluster_id=C363 | ||
|description=CAGE_peak_at_chr18:21479408..21479415,- | |description=CAGE_peak_at_chr18:21479408..21479415,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002621!3.53e-17!3;CL:0000066!1.40e-16!254;CL:0002076!2.35e-16!43;CL:0000223!2.78e-11!59;CL:0000240!2.25e-09!6;CL:0000311!2.25e-09!6;CL:0000079!2.25e-09!6;CL:0000237!2.25e-09!6;CL:0000036!2.25e-09!6;CL:0000357!2.25e-09!6;CL:0000114!2.25e-09!6;CL:0002251!4.86e-09!21;CL:0002166!9.08e-09!3;CL:0002159!2.15e-07!13;CL:0002336!4.01e-07!1;CL:0002261!4.01e-07!1;CL:0002170!4.01e-07!1;CL:0002368!4.82e-07!13;CL:0002327!7.59e-07!4 | |ontology_enrichment_celltype=CL:0002621!3.53e-17!3;CL:0000066!1.40e-16!254;CL:0002076!2.35e-16!43;CL:0000223!2.78e-11!59;CL:0000240!2.25e-09!6;CL:0000311!2.25e-09!6;CL:0000079!2.25e-09!6;CL:0000237!2.25e-09!6;CL:0000036!2.25e-09!6;CL:0000357!2.25e-09!6;CL:0000114!2.25e-09!6;CL:0002251!4.86e-09!21;CL:0002166!9.08e-09!3;CL:0002159!2.15e-07!13;CL:0002336!4.01e-07!1;CL:0002261!4.01e-07!1;CL:0002170!4.01e-07!1;CL:0002368!4.82e-07!13;CL:0002327!7.59e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002166;3.27e-23;3!CL:0002231;3.27e-23;3!CL:0002327;8.69e-18;4 | |ontology_enrichment_celltype_v019=CL:0002166;3.27e-23;3!CL:0002231;3.27e-23;3!CL:0002327;8.69e-18;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.27e-23,3;CL:0002231,4.09e-23,3;CL:0002327,7.35e-18,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3111!8.49e-07!1;DOID:3603!8.49e-07!1 | |ontology_enrichment_disease=DOID:3111!8.49e-07!1;DOID:3603!8.49e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!3.53e-17!3;UBERON:0004913!6.02e-07!1;UBERON:0003703!6.02e-07!1;UBERON:0001174!6.02e-07!1;UBERON:0004914!6.02e-07!1;UBERON:0001911!7.59e-07!4;UBERON:0005333!7.59e-07!4;UBERON:0008425!7.59e-07!4;UBERON:0005311!7.59e-07!4;UBERON:0001708!9.01e-07!4;UBERON:0001704!9.01e-07!4;UBERON:0001828!9.64e-07!8;UBERON:0005631!9.68e-07!14;UBERON:0000158!9.68e-07!14 | |ontology_enrichment_uberon=UBERON:0001949!3.53e-17!3;UBERON:0004913!6.02e-07!1;UBERON:0003703!6.02e-07!1;UBERON:0001174!6.02e-07!1;UBERON:0004914!6.02e-07!1;UBERON:0001911!7.59e-07!4;UBERON:0005333!7.59e-07!4;UBERON:0008425!7.59e-07!4;UBERON:0005311!7.59e-07!4;UBERON:0001708!9.01e-07!4;UBERON:0001704!9.01e-07!4;UBERON:0001828!9.64e-07!8;UBERON:0005631!9.68e-07!14;UBERON:0000158!9.68e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;8.69e-18;4!UBERON:0001708;8.69e-18;4!UBERON:0008895;8.69e-18;4!UBERON:0011159;1.60e-14;5!UBERON:0002367;2.47e-07;11!UBERON:0010147;2.47e-07;11!UBERON:0011137;2.47e-07;11!UBERON:0010323;2.47e-07;11!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001911;8.69e-18;4!UBERON:0001708;8.69e-18;4!UBERON:0008895;8.69e-18;4!UBERON:0011159;1.60e-14;5!UBERON:0002367;2.47e-07;11!UBERON:0010147;2.47e-07;11!UBERON:0011137;2.47e-07;11!UBERON:0010323;2.47e-07;11!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0001708,8.69e-18,4;UBERON:0008895,8.69e-18,4;UBERON:0011159,1.60e-14,5;UBERON:0010188,2.45e-12,6;UBERON:0002539,2.45e-12,6;UBERON:0008816,2.45e-12,6;UBERON:0000076,1.24e-09,8;UBERON:0005153,2.92e-08,37;UBERON:0010323,2.47e-07,11;UBERON:0002367,2.63e-07,11;UBERON:0010147,2.63e-07,11;UBERON:0009846,2.63e-07,11;UBERON:0003353,2.63e-07,11;UBERON:0004902,2.63e-07,11;UBERON:0003820,2.63e-07,11;UBERON:0009847,2.63e-07,11;UBERON:0003937,8.38e-07,12;UBERON:0005399,8.38e-07,12;UBERON:0005157,1.00e-06,47 | |||
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|short_description=p@chr18:21479408..21479415,- | |short_description=p@chr18:21479408..21479415,- | ||
}} | }} |
Latest revision as of 00:00, 26 July 2015
Short description: | p@chr18:21479408..21479415, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21479408..21479415, - |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.27e-23 | 3 |
epithelial cell of prostate | 4.09e-23 | 3 |
mammary gland epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
jaw skeleton | 8.69e-18 | 4 |
splanchnocranium | 8.69e-18 | 4 |
primary subdivision of cranial skeletal system | 1.60e-14 | 5 |
protuberance | 2.45e-12 | 6 |
pharyngeal arch | 2.45e-12 | 6 |
embryonic head | 2.45e-12 | 6 |
external ectoderm | 1.24e-09 | 8 |
epithelial bud | 2.92e-08 | 37 |
cranial skeletal system | 2.47e-07 | 11 |
prostate gland | 2.63e-07 | 11 |
male accessory sex gland | 2.63e-07 | 11 |
embryonic cloacal epithelium | 2.63e-07 | 11 |
epithelium of hindgut | 2.63e-07 | 11 |
urogenital sinus epithelium | 2.63e-07 | 11 |
prostate bud | 2.63e-07 | 11 |
prostate field | 2.63e-07 | 11 |
sex gland | 8.38e-07 | 12 |
male reproductive gland | 8.38e-07 | 12 |
epithelial fold | 1.00e-06 | 47 |