FFCP PHASE1:Hg19::chr18:21508639..21508652,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:21508639..21508652,+ | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21508639..21508652,+ | |||
|id=chr18:21508639..21508652,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.55e-18!43;CL:0000066!2.50e-16!254;CL:0000223!5.03e-12!59;CL:0002368!1.85e-11!13;CL:0002621!1.02e-08!3;CL:0000349!1.19e-08!3;CL:0002577!1.19e-08!3;CL:0002541!1.42e-08!3;CL:0002328!4.33e-08!3;CL:0002159!4.46e-07!13;CL:0002202!8.50e-07!9;CL:0002632!8.50e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002159;4.65e-15;14!CL:0002166;1.57e-12;3!CL:0002621;1.71e-12;3!CL:0002541;1.81e-12;3!CL:0002577;7.35e-12;3!CL:0000349;7.44e-11;19!CL:0002327;4.05e-09;4!CL:0000362;5.75e-09;9!CL:0000312;1.41e-07;5!CL:0002077;2.85e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,3.79e-15,14;CL:0002166,1.62e-12,3;CL:0002621,1.81e-12,3;CL:0002541,1.92e-12,3;CL:0002577,6.96e-12,3;CL:0000349,7.45e-11,19;CL:0002327,4.23e-09,4;CL:0000362,4.68e-09,9;CL:0002077,1.58e-08,34;CL:0000312,1.12e-07,5;CL:0000066,1.56e-07,253;CL:0002076,9.70e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.17e-10;1 | |||
|ontology_enrichment_disease=DOID:1749!6.14e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.23e-16!14;UBERON:0000158!1.23e-16!14;UBERON:0003124!3.40e-13!7;UBERON:0000478!1.06e-12!24;UBERON:0001949!1.02e-08!3;UBERON:0003100!1.24e-08!41;UBERON:0000476!1.42e-08!3;UBERON:0000920!1.42e-08!3;UBERON:0000995!3.90e-08!21;UBERON:0004175!4.03e-08!25;UBERON:0004815!4.33e-08!3;UBERON:0002031!4.33e-08!3;UBERON:0005795!1.10e-07!22;UBERON:0003975!1.10e-07!22;UBERON:0005153!6.31e-07!37;UBERON:0004119!6.53e-07!169;UBERON:0000925!6.53e-07!169;UBERON:0006595!6.53e-07!169;UBERON:0005156!9.64e-07!59;UBERON:0000990!9.64e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.71e-12;3!UBERON:0003124;1.81e-12;3!UBERON:0000920;1.81e-12;3!UBERON:0000478;4.32e-12;24!UBERON:0001708;1.28e-09;4!UBERON:0008895;1.28e-09;4!UBERON:0001987;4.05e-09;4!UBERON:0001911;4.05e-09;4!UBERON:0005631;3.55e-08;10!UBERON:0000158;3.55e-08;10!UBERON:0011159;7.33e-08;5!UBERON:0000486;6.76e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.13e-19,7;UBERON:0005631,8.87e-15,14;UBERON:0000158,8.87e-15,14;UBERON:0001949,1.81e-12,3;UBERON:0000920,1.92e-12,3;UBERON:0000478,4.32e-12,24;UBERON:0001708,1.31e-09,4;UBERON:0008895,1.31e-09,4;UBERON:0001987,3.89e-09,4;UBERON:0004340,3.89e-09,4;UBERON:0001911,4.23e-09,4;UBERON:0005333,4.23e-09,4;UBERON:0008425,4.23e-09,4;UBERON:0005311,4.23e-09,4;UBERON:0011159,7.46e-08,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09217365061275,4.63668405004419,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86575485194663,0,2.41269533787914,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88726725615324,3.1190521393325,1.43293636324557,1.16253575405585,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,1.20956117331872,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,4.21063587636898,0.736647911487171,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0,0,0,3.25030123018261,0,0,0,0,0,0,0,0,0,3.30569830721956,0,0.893288987462089,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,1.08890984861323,0,0.43050537267123,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,1.22864280839693,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,0.183195186803725,7.99552164027952,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0.207376382794494,0,0,0,0,0,0,0.520679215005393,0.195984794828755,0.0870592065804026,0.52418000472609,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,1.24415452006595,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,1.14553434272025,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr18:21508639..21508652,+ | |||
}} |
Latest revision as of 00:00, 26 July 2015
Short description: | p@chr18:21508639..21508652, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21508639..21508652, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 3.79e-15 | 14 |
epithelial cell of Malassez | 1.62e-12 | 3 |
gingival epithelial cell | 1.81e-12 | 3 |
chorionic membrane mesenchymal stem cell | 1.92e-12 | 3 |
placental epithelial cell | 6.96e-12 | 3 |
extraembryonic cell | 7.45e-11 | 19 |
mammary gland epithelial cell | 4.23e-09 | 4 |
epidermal cell | 4.68e-09 | 9 |
ecto-epithelial cell | 1.58e-08 | 34 |
keratinocyte | 1.12e-07 | 5 |
epithelial cell | 1.56e-07 | 253 |
endo-epithelial cell | 9.70e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.13e-19 | 7 |
extraembryonic membrane | 8.87e-15 | 14 |
membranous layer | 8.87e-15 | 14 |
gingival epithelium | 1.81e-12 | 3 |
egg chorion | 1.92e-12 | 3 |
extraembryonic structure | 4.32e-12 | 24 |
jaw skeleton | 1.31e-09 | 4 |
splanchnocranium | 1.31e-09 | 4 |
placenta | 3.89e-09 | 4 |
allantois | 3.89e-09 | 4 |
mammary gland | 4.23e-09 | 4 |
mammary bud | 4.23e-09 | 4 |
mammary ridge | 4.23e-09 | 4 |
mammary placode | 4.23e-09 | 4 |
primary subdivision of cranial skeletal system | 7.46e-08 | 5 |