FFCP PHASE1:Hg19::chr18:47139060..47139064,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:47139060..47139064,+ | |||
|description=CAGE_peak_at_chr18:47139060..47139064,+ | |description=CAGE_peak_at_chr18:47139060..47139064,+ | ||
|id=chr18:47139060..47139064,+ | |id=chr18:47139060..47139064,+ | ||
|ontology_enrichment_celltype=CL:0000244!4.11e-16!4;CL:0000731!4.11e-16!4;CL:1000507!2.12e-14!12;CL:1000494!2.12e-14!12;CL:1000449!9.59e-11!16;CL:0002166!2.65e-10!3;CL:0002605!7.51e-10!3;CL:1000497!1.59e-09!18;CL:0002518!1.59e-09!18;CL:0002159!8.50e-09!13;CL:0000319!5.79e-08!1;CL:0000946!1.06e-07!1;CL:0000786!1.06e-07!1;CL:0000980!1.06e-07!1;CL:1001319!1.14e-07!1;CL:1000600!1.14e-07!1 | |ontology_enrichment_celltype=CL:0000244!4.11e-16!4;CL:0000731!4.11e-16!4;CL:1000507!2.12e-14!12;CL:1000494!2.12e-14!12;CL:1000449!9.59e-11!16;CL:0002166!2.65e-10!3;CL:0002605!7.51e-10!3;CL:1000497!1.59e-09!18;CL:0002518!1.59e-09!18;CL:0002159!8.50e-09!13;CL:0000319!5.79e-08!1;CL:0000946!1.06e-07!1;CL:0000786!1.06e-07!1;CL:0000980!1.06e-07!1;CL:1001319!1.14e-07!1;CL:1000600!1.14e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002166;3.59e-30;3!CL:0002159;1.85e-25;14!CL:0000244;6.42e-23;4!CL:0000731;6.42e-23;4!CL:1000507;1.46e-20;10!CL:1000494;1.46e-20;10!CL:1000449;5.89e-14;15!CL:1000497;2.14e-12;17!CL:0002518;2.14e-12;17!CL:0000317;2.45e-12;2!CL:1000448;2.45e-12;2!CL:0002308;2.45e-12;2!CL:0002140;2.45e-12;2!CL:0000362;9.23e-11;9!CL:0002077;3.32e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,4.17e-30,3;CL:0002159,1.97e-25,14;CL:0000244,8.96e-23,4;CL:0000731,8.96e-23,4;CL:1000507,1.12e-20,10;CL:1000494,1.12e-20,10;CL:1000449,4.94e-14,15;CL:1000497,1.83e-12,17;CL:0002518,1.83e-12,17;CL:0000317,2.90e-12,2;CL:1000448,2.90e-12,2;CL:0002308,2.90e-12,2;CL:0002140,2.90e-12,2;CL:0000362,9.23e-11,9;CL:0002077,9.52e-11,34;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!5.79e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!8.04e-22!5;UBERON:0005910!3.18e-18!6;UBERON:0009773!2.12e-14!12;UBERON:0001231!2.12e-14!12;UBERON:0004810!2.12e-14!12;UBERON:0006554!3.40e-11!44;UBERON:0001008!6.50e-11!45;UBERON:0004211!9.59e-11!16;UBERON:0001285!9.59e-11!16;UBERON:0007684!9.59e-11!16;UBERON:0003220!9.59e-11!16;UBERON:0004208!9.59e-11!16;UBERON:0006555!4.25e-10!17;UBERON:0005103!4.25e-10!17;UBERON:0000083!4.25e-10!17;UBERON:0009201!4.25e-10!17;UBERON:0004819!4.25e-10!17;UBERON:0006553!4.25e-10!17;UBERON:0003074!4.25e-10!17;UBERON:0003060!4.25e-10!17;UBERON:0009722!1.43e-09!11;UBERON:0007690!1.43e-09!11;UBERON:0000080!1.59e-09!18;UBERON:0002120!1.59e-09!18;UBERON:0004875!1.59e-09!18;UBERON:0005721!1.59e-09!18;UBERON:0005754!1.59e-09!18;UBERON:0007297!1.59e-09!18;UBERON:0004876!1.52e-08!20;UBERON:0003887!3.98e-08!21;UBERON:0001708!6.21e-08!4;UBERON:0001704!6.21e-08!4;UBERON:0004645!1.14e-07!1;UBERON:0001256!1.14e-07!1;UBERON:0001259!1.14e-07!1;UBERON:0002370!2.43e-07!4;UBERON:0005058!2.43e-07!4;UBERON:0009113!2.43e-07!4;UBERON:0003295!2.43e-07!4;UBERON:0005562!2.43e-07!4;UBERON:0000489!3.30e-07!32;UBERON:0008814!4.71e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;6.42e-23;4!UBERON:0008895;6.42e-23;4!UBERON:0004211;1.46e-20;10!UBERON:0009773;1.46e-20;10!UBERON:0001231;1.46e-20;10!UBERON:0004810;1.46e-20;10!UBERON:0006554;1.46e-18;30!UBERON:0001008;1.46e-18;30!UBERON:0011159;1.48e-18;5!UBERON:0000365;1.48e-18;5!UBERON:0005910;1.22e-15;6!UBERON:0006555;5.89e-14;15!UBERON:0004819;5.89e-14;15!UBERON:0001285;5.89e-14;15!UBERON:0007684;5.89e-14;15!UBERON:0002419;2.45e-12;2!UBERON:0007771;2.45e-12;2!UBERON:0003297;2.45e-12;2!UBERON:0001821;2.45e-12;2!UBERON:0003487;2.45e-12;2!UBERON:0001820;2.45e-12;2!UBERON:0011137;5.63e-09;11!UBERON:0010323;5.63e-09;11!UBERON:0002113;5.73e-09;24!UBERON:0011143;5.73e-09;24!UBERON:0000486;2.65e-08;12!UBERON:0000489;1.59e-07;29!UBERON:0001003;8.09e-07;15!UBERON:0007376;8.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,7.18e-23,4;UBERON:0008895,7.18e-23,4;UBERON:0004810,1.12e-20,10;UBERON:0011159,1.62e-18,5;UBERON:0000365,1.93e-18,5;UBERON:0010188,1.31e-15,6;UBERON:0002539,1.31e-15,6;UBERON:0008816,1.31e-15,6;UBERON:0005910,1.52e-15,6;UBERON:0004211,4.94e-14,15;UBERON:0009773,4.94e-14,15;UBERON:0001231,4.94e-14,15;UBERON:0001285,4.94e-14,15;UBERON:0007684,4.94e-14,15;UBERON:0004208,4.94e-14,15;UBERON:0006555,3.36e-13,16;UBERON:0004819,3.36e-13,16;UBERON:0002419,2.90e-12,2;UBERON:0007771,2.90e-12,2;UBERON:0003297,2.90e-12,2;UBERON:0001821,2.90e-12,2;UBERON:0003487,2.90e-12,2;UBERON:0001820,2.90e-12,2;UBERON:0005089,2.90e-12,2;UBERON:0005088,2.90e-12,2;UBERON:0006554,6.08e-12,47;UBERON:0001008,1.07e-11,48;UBERON:0010323,5.87e-09,11;UBERON:0002113,2.28e-08,26;UBERON:0003918,2.28e-08,26;UBERON:0011143,2.28e-08,26;UBERON:0005095,2.28e-08,26;UBERON:0007687,2.28e-08,26;UBERON:0011137,3.14e-07,14;UBERON:0000489,4.12e-07,31;UBERON:0001003,8.09e-07,15;UBERON:0007376,8.09e-07,15;UBERON:0007383,8.09e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17587489739202,1.55952606966625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,2.92658280996776,1.56869953835371,0,1.47772280450026,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29151611801369,0,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0.0645889098360061,0.186224142887574,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17587489739202,1.55952606966625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,2.92658280996776,1.56869953835371,0,1.47772280450026,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29151611801369,0,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0.0645889098360061,0.186224142887574,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:47139060..47139064,+ | |short_description=p@chr18:47139060..47139064,+ | ||
}} | }} |
Latest revision as of 01:12, 26 July 2015
Short description: | p@chr18:47139060..47139064, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:47139060..47139064, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 4.17e-30 | 3 |
general ecto-epithelial cell | 1.97e-25 | 14 |
transitional epithelial cell | 8.96e-23 | 4 |
urothelial cell | 8.96e-23 | 4 |
kidney tubule cell | 1.12e-20 | 10 |
nephron tubule epithelial cell | 1.12e-20 | 10 |
epithelial cell of nephron | 4.94e-14 | 15 |
kidney cell | 1.83e-12 | 17 |
kidney epithelial cell | 1.83e-12 | 17 |
sebum secreting cell | 2.90e-12 | 2 |
epithelial cell of sweat gland | 2.90e-12 | 2 |
epithelial cell of skin gland | 2.90e-12 | 2 |
acinar cell of sebaceous gland | 2.90e-12 | 2 |
epidermal cell | 9.23e-11 | 9 |
ecto-epithelial cell | 9.52e-11 | 34 |
epithelial cell | 8.89e-07 | 253 |