FFCP PHASE1:Hg19::chr18:53735637..53735649,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:53735637..53735649,-
|short_description=p@chr18:53735637..53735649,-
|description=CAGE_peak_at_chr18:53735637..53735649,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:53735637..53735649,- | |||
|description=CAGE_peak_at_chr18:53735637..53735649,- | |||
|id=chr18:53735637..53735649,- | |||
|ontology_enrichment_celltype=CL:0000057!8.52e-11!75;CL:0002620!1.00e-10!23;CL:0000055!1.62e-08!180;CL:0002573!2.67e-07!2;CL:0000064!3.83e-07!3;CL:0005012!3.83e-07!3;CL:0000067!3.83e-07!3;CL:0002304!3.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000312;5.35e-08;5!CL:0000240;7.17e-07;6!CL:0000311;7.17e-07;6!CL:0000079;7.17e-07;6!CL:0000237;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,5.35e-08,5;CL:0000240,7.17e-07,6;CL:0000311,7.17e-07,6;CL:0000079,7.17e-07,6;CL:0000237,7.17e-07,6;CL:0000036,7.17e-07,6;CL:0000357,7.17e-07,6;CL:0000114,7.17e-07,6;CL:0002620,9.95e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000357;7.17e-07;6!CL:0000114;7.17e-07;6 | |||
|ontology_enrichment_disease=DOID:17!5.28e-08!5;DOID:450!5.28e-08!5;DOID:66!5.28e-08!5;DOID:423!5.28e-08!5;DOID:0080000!5.28e-08!5;DOID:11722!5.28e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:4231;9.86e-18;2!DOID:1907;9.86e-18;2!DOID:1115;1.42e-07;20!DOID:201;8.72e-07;6!DOID:0060100;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,7.67e-18,2;DOID:1907,7.67e-18,2;DOID:1115,1.42e-07,20;DOID:201,8.02e-07,6;DOID:0060100,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.42e-10!95;UBERON:0000488!5.25e-09!4;UBERON:0002097!9.38e-09!40;UBERON:0002199!1.39e-08!45;UBERON:0002416!1.39e-08!45;UBERON:0001778!3.83e-07!3;UBERON:0001775!3.83e-07!3;UBERON:0002200!4.66e-07!11;UBERON:0006876!4.66e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.50e-09;4!UBERON:0004785;1.50e-09;4!UBERON:0002097;5.83e-07;41!UBERON:0002199;5.87e-07;46!UBERON:0002416;5.87e-07;46!UBERON:0000974;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.57e-09,4;UBERON:0004785,1.57e-09,4;UBERON:0002097,5.06e-08,41;UBERON:0002199,3.19e-07,46;UBERON:0002416,3.19e-07,46 | |||
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| ||
|short_description=p@chr18:53735637..53735649,- | |||
}} | }} |
Latest revision as of 01:26, 26 July 2015
Short description: | p@chr18:53735637..53735649, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:53735637..53735649, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 5.35e-08 | 5 |
stratified squamous epithelial cell | 7.17e-07 | 6 |
keratin accumulating cell | 7.17e-07 | 6 |
stratified epithelial cell | 7.17e-07 | 6 |
keratinizing barrier epithelial cell | 7.17e-07 | 6 |
epithelial fate stem cell | 7.17e-07 | 6 |
stratified epithelial stem cell | 7.17e-07 | 6 |
surface ectodermal cell | 7.17e-07 | 6 |
skin fibroblast | 9.95e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.57e-09 | 4 |
respiratory system mucosa | 1.57e-09 | 4 |
skin of body | 5.06e-08 | 41 |
integument | 3.19e-07 | 46 |
integumental system | 3.19e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 7.67e-18 | 2 |
malignant fibroxanthoma | 7.67e-18 | 2 |
sarcoma | 1.42e-07 | 20 |
connective tissue cancer | 8.02e-07 | 6 |
musculoskeletal system cancer | 8.02e-07 | 6 |