FFCP PHASE1:Hg19::chr18:61586483..61586487,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:61586483..61586487,+ | |||
|description=CAGE_peak_at_chr18:61586483..61586487,+ | |description=CAGE_peak_at_chr18:61586483..61586487,+ | ||
|id=chr18:61586483..61586487,+ | |id=chr18:61586483..61586487,+ | ||
|ontology_enrichment_celltype=CL:0002535!3.01e-14!2;CL:0002573!2.85e-09!2;CL:1001319!6.10e-08!1;CL:1000600!6.10e-08!1;CL:0000319!1.04e-07!1;CL:0002379!1.18e-07!1 | |ontology_enrichment_celltype=CL:0002535!3.01e-14!2;CL:0002573!2.85e-09!2;CL:1001319!6.10e-08!1;CL:1000600!6.10e-08!1;CL:0000319!1.04e-07!1;CL:0002379!1.18e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002535;5.15e-21;2 | |ontology_enrichment_celltype_v019=CL:0002535;5.15e-21;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.70e-21,2;CL:0000076,9.94e-11,63 | |||
|ontology_enrichment_development_v019=UBERON:0008814;5.15e-21;2!UBERON:0010056;5.15e-21;2 | |ontology_enrichment_development_v019=UBERON:0008814;5.15e-21;2!UBERON:0010056;5.15e-21;2 | ||
|ontology_enrichment_disease=DOID:4362!1.40e-12!5;DOID:1749!4.66e-12!14;DOID:14566!6.22e-11!239;DOID:305!7.12e-11!106;DOID:0050687!8.32e-10!143;DOID:162!4.73e-09!235;DOID:3111!5.70e-08!1;DOID:3603!5.70e-08!1;DOID:3371!6.52e-08!1;DOID:4549!6.52e-08!1;DOID:5861!6.52e-08!1;DOID:6496!6.52e-08!1;DOID:3151!6.97e-08!1;DOID:3149!6.97e-08!1;DOID:3112!7.45e-08!1;DOID:3030!1.04e-07!1;DOID:3620!1.18e-07!1;DOID:3565!1.18e-07!1 | |ontology_enrichment_disease=DOID:4362!1.40e-12!5;DOID:1749!4.66e-12!14;DOID:14566!6.22e-11!239;DOID:305!7.12e-11!106;DOID:0050687!8.32e-10!143;DOID:162!4.73e-09!235;DOID:3111!5.70e-08!1;DOID:3603!5.70e-08!1;DOID:3371!6.52e-08!1;DOID:4549!6.52e-08!1;DOID:5861!6.52e-08!1;DOID:6496!6.52e-08!1;DOID:3151!6.97e-08!1;DOID:3149!6.97e-08!1;DOID:3112!7.45e-08!1;DOID:3030!1.04e-07!1;DOID:3620!1.18e-07!1;DOID:3565!1.18e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.48e-45;14!DOID:4231;5.15e-21;2!DOID:1907;5.15e-21;2!DOID:4362;3.10e-09;5!DOID:201;6.55e-08;6!DOID:0060100;6.55e-08;6 | |ontology_enrichment_disease_v019=DOID:1749;1.48e-45;14!DOID:4231;5.15e-21;2!DOID:1907;5.15e-21;2!DOID:4362;3.10e-09;5!DOID:201;6.55e-08;6!DOID:0060100;6.55e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.76e-45,14;DOID:4231,3.81e-21,2;DOID:1907,3.81e-21,2;DOID:4362,3.22e-09,5;DOID:201,5.92e-08,6;DOID:0060100,5.92e-08,6;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0006955!3.01e-14!2;UBERON:0004801!3.01e-14!2;UBERON:0000002!1.45e-10!6;UBERON:0001560!1.45e-10!6;UBERON:0002294!1.19e-08!7;UBERON:0001173!1.19e-08!7;UBERON:0004912!1.19e-08!7;UBERON:0000997!2.70e-08!1;UBERON:0005056!2.70e-08!1;UBERON:0004645!6.10e-08!1;UBERON:0001256!6.10e-08!1;UBERON:0001259!6.10e-08!1;UBERON:0001282!1.54e-07!1;UBERON:0009842!1.54e-07!1;UBERON:0003704!1.54e-07!1;UBERON:0001171!1.54e-07!1;UBERON:0001172!1.54e-07!1;UBERON:0002394!4.03e-07!4;UBERON:0003928!4.03e-07!4 | |ontology_enrichment_uberon=UBERON:0006955!3.01e-14!2;UBERON:0004801!3.01e-14!2;UBERON:0000002!1.45e-10!6;UBERON:0001560!1.45e-10!6;UBERON:0002294!1.19e-08!7;UBERON:0001173!1.19e-08!7;UBERON:0004912!1.19e-08!7;UBERON:0000997!2.70e-08!1;UBERON:0005056!2.70e-08!1;UBERON:0004645!6.10e-08!1;UBERON:0001256!6.10e-08!1;UBERON:0001259!6.10e-08!1;UBERON:0001282!1.54e-07!1;UBERON:0009842!1.54e-07!1;UBERON:0003704!1.54e-07!1;UBERON:0001171!1.54e-07!1;UBERON:0001172!1.54e-07!1;UBERON:0002394!4.03e-07!4;UBERON:0003928!4.03e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;6.62e-41;1!UBERON:0005056;6.62e-41;1!UBERON:0004176;6.62e-41;1!UBERON:0006955;5.15e-21;2!UBERON:0004801;5.15e-21;2!UBERON:0001723;1.71e-14;3!UBERON:0001033;1.71e-14;3!UBERON:0003343;3.26e-11;4!UBERON:0004785;3.26e-11;4!UBERON:0000002;6.55e-08;6!UBERON:0000974;6.55e-08;6!UBERON:0001560;6.55e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0000997;6.62e-41;1!UBERON:0005056;6.62e-41;1!UBERON:0004176;6.62e-41;1!UBERON:0006955;5.15e-21;2!UBERON:0004801;5.15e-21;2!UBERON:0001723;1.71e-14;3!UBERON:0001033;1.71e-14;3!UBERON:0003343;3.26e-11;4!UBERON:0004785;3.26e-11;4!UBERON:0000002;6.55e-08;6!UBERON:0000974;6.55e-08;6!UBERON:0001560;6.55e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.62e-41,1;UBERON:0005056,6.62e-41,1;UBERON:0006955,5.70e-21,2;UBERON:0004801,5.70e-21,2;UBERON:0001723,1.60e-14,3;UBERON:0001033,1.60e-14,3;UBERON:0010056,1.60e-14,3;UBERON:0003343,3.10e-11,4;UBERON:0004785,3.10e-11,4;UBERON:0000002,6.78e-08,6;UBERON:0001560,6.78e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93977192243133,1.21882889212564,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0.320635281006135,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,1.65695355226657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5018336599544,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.407016343054873,0.533636729388577,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93977192243133,1.21882889212564,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0.320635281006135,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,1.65695355226657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5018336599544,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.407016343054873,0.533636729388577,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:61586483..61586487,+ | |short_description=p@chr18:61586483..61586487,+ | ||
}} | }} |
Latest revision as of 01:54, 26 July 2015
Short description: | p@chr18:61586483..61586487, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:61586483..61586487, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.70e-21 | 2 |
squamous epithelial cell | 9.94e-11 | 63 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 6.62e-41 | 1 |
external female genitalia | 6.62e-41 | 1 |
uterine epithelium | 5.70e-21 | 2 |
cervix epithelium | 5.70e-21 | 2 |
tongue | 1.60e-14 | 3 |
gustatory system | 1.60e-14 | 3 |
future tongue | 1.60e-14 | 3 |
mucosa of oral region | 3.10e-11 | 4 |
respiratory system mucosa | 3.10e-11 | 4 |
uterine cervix | 6.78e-08 | 6 |
neck of organ | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.76e-45 | 14 |
histiocytoma | 3.81e-21 | 2 |
malignant fibroxanthoma | 3.81e-21 | 2 |
cervical cancer | 3.22e-09 | 5 |
connective tissue cancer | 5.92e-08 | 6 |
musculoskeletal system cancer | 5.92e-08 | 6 |
cell type cancer | 1.55e-07 | 143 |