FFCP PHASE1:Hg19::chr18:77557973..77557984,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:77557973..77557984,+ | |||
|coexpression_cluster_id=C3742 | |||
|description=CAGE_peak_at_chr18:77557973..77557984,+ | |description=CAGE_peak_at_chr18:77557973..77557984,+ | ||
|id=chr18:77557973..77557984,+ | |id=chr18:77557973..77557984,+ | ||
|ontology_enrichment_celltype=CL:0000784!1.22e-07!3;CL:0002504!2.04e-07!3;CL:1000279!2.04e-07!3;CL:1000280!2.04e-07!3 | |ontology_enrichment_celltype=CL:0000784!1.22e-07!3;CL:0002504!2.04e-07!3;CL:1000279!2.04e-07!3;CL:1000280!2.04e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.07e-27;3!CL:0002504;5.06e-27;3!CL:1000279;5.06e-27;3!CL:1000280;5.06e-27;3!CL:0002549;2.22e-18;2!CL:0002195;5.33e-18;2!CL:0002571;5.33e-18;2!CL:0002622;2.52e-12;3!CL:0002599;2.97e-10;1!CL:0002032;7.22e-10;1!CL:0000557;7.22e-10;1!CL:0000451;6.00e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,8.55e-28,3;CL:0002504,7.88e-27,3;CL:1000279,7.88e-27,3;CL:1000280,7.88e-27,3;CL:0002549,1.31e-18,2;CL:0002195,3.45e-18,2;CL:0002571,3.45e-18,2;CL:0002622,2.38e-12,3;CL:0002599,2.84e-10,1;CL:0000451,5.66e-08,10;CL:0000192,7.69e-07,43;CL:0000514,7.69e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.63e-10!69;UBERON:0006238!5.63e-10!69;UBERON:0002616!1.15e-09!59;UBERON:0005743!2.35e-08!86;UBERON:0001017!3.47e-08!82;UBERON:0000073!1.30e-07!94;UBERON:0001016!1.30e-07!94;UBERON:0001049!6.81e-07!57;UBERON:0005068!6.81e-07!57;UBERON:0006241!6.81e-07!57;UBERON:0007135!6.81e-07!57 | |ontology_enrichment_uberon=UBERON:0000955!5.63e-10!69;UBERON:0006238!5.63e-10!69;UBERON:0002616!1.15e-09!59;UBERON:0005743!2.35e-08!86;UBERON:0001017!3.47e-08!82;UBERON:0000073!1.30e-07!94;UBERON:0001016!1.30e-07!94;UBERON:0001049!6.81e-07!57;UBERON:0005068!6.81e-07!57;UBERON:0006241!6.81e-07!57;UBERON:0007135!6.81e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;2.22e-18;2!UBERON:0005358;2.22e-18;2!UBERON:0001886;2.22e-18;2!UBERON:0004086;2.22e-18;2!UBERON:0005282;2.22e-18;2!UBERON:0005281;2.22e-18;2!UBERON:0005284;3.82e-16;5!UBERON:0006876;9.46e-13;11!UBERON:0001155;2.16e-09;9!UBERON:0000059;9.03e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.31e-18,2;UBERON:0005358,1.31e-18,2;UBERON:0001886,1.31e-18,2;UBERON:0004086,1.31e-18,2;UBERON:0005282,1.31e-18,2;UBERON:0005281,1.31e-18,2;UBERON:0005284,2.59e-16,5;UBERON:0006876,6.74e-13,11;UBERON:0001155,2.49e-09,9;UBERON:0000059,1.01e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0,1.03423704220986,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,5.72377498332821,2.85997455390064,7.4291500265913,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817309515567294,1.36221684880438,2.88087962239999,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,2.15585442544872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.87192013766656,0,0,0,0,0,0,0,0,0,1.28680194292333,1.08524321078289,0,0,1.77695974371273,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14814448164607,0,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,1.33441135746677,0,0,0,0,1.2591072030832,2.19629623788844,3.06312246098785,0,0,0,2.43816869544795,0,0,0,0.565621727814851,0,0,0,0,0,1.31178950409327,0,0,0,0,0.0982490410131212,0,0,0,0,0,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.546746009922222,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.918736432059601,0.192687675289379,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0.0657727735628491,0,0,0,0.471346769748006,0,0,0,0,0.500335809236594,0.47404083519818,0,0,2.40513409419076,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0.157771562193185,0.203974470572744,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0.320568492303233 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| ||
|short_description=p@chr18:77557973..77557984,+ | |short_description=p@chr18:77557973..77557984,+ | ||
}} | }} |
Latest revision as of 02:30, 26 July 2015
Short description: | p@chr18:77557973..77557984, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:77557973..77557984, + |
Coexpression cluster: | C3742_Dendritic_granulocyte_Smooth_Mesenchymal_Fibroblast_merkel_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 8.55e-28 | 3 |
enteric smooth muscle cell | 7.88e-27 | 3 |
smooth muscle cell of large intestine | 7.88e-27 | 3 |
smooth muscle cell of colon | 7.88e-27 | 3 |
fibroblast of choroid plexus | 1.31e-18 | 2 |
hepatic stem cell | 3.45e-18 | 2 |
hepatic mesenchymal stem cell | 3.45e-18 | 2 |
prostate stromal cell | 2.38e-12 | 3 |
smooth muscle cell of the esophagus | 2.84e-10 | 1 |
dendritic cell | 5.66e-08 | 10 |
smooth muscle cell | 7.69e-07 | 43 |
smooth muscle myoblast | 7.69e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.31e-18 | 2 |
ventricle of nervous system | 1.31e-18 | 2 |
choroid plexus | 1.31e-18 | 2 |
brain ventricle | 1.31e-18 | 2 |
ventricular system of brain | 1.31e-18 | 2 |
ventricular system of central nervous system | 1.31e-18 | 2 |
brain vasculature | 2.59e-16 | 5 |
vasculature of organ | 6.74e-13 | 11 |
colon | 2.49e-09 | 9 |
large intestine | 1.01e-07 | 11 |