FFCP PHASE1:Hg19::chr19:10665857..10665900,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:10665857..10665900,- | |||
|coexpression_cluster_id=C234 | |coexpression_cluster_id=C234 | ||
|description=CAGE_peak_at_chr19:10665857..10665900,- | |description=CAGE_peak_at_chr19:10665857..10665900,- | ||
Latest revision as of 03:08, 26 July 2015
| Short description: | p@chr19:10665857..10665900, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr19:10665857..10665900, - |
| Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr19:10665857..10665900- |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gingival epithelial cell | 6.12e-50 | 3 |
| epithelial cell of Malassez | 4.61e-23 | 3 |
| epithelial cell of alimentary canal | 1.02e-20 | 20 |
| endo-epithelial cell | 5.42e-19 | 42 |
| endodermal cell | 1.16e-13 | 58 |
| epithelial cell | 5.08e-07 | 253 |
| epithelial cell of prostate | 6.14e-07 | 3 |
| bronchial epithelial cell | 6.88e-07 | 3 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| gingival epithelium | 6.12e-50 | 3 |
| mouth mucosa | 9.18e-32 | 13 |
| mucosa | 1.02e-20 | 20 |
| epithelium of mucosa | 3.09e-19 | 8 |
| gingiva | 3.09e-19 | 8 |
| oral opening | 7.52e-19 | 22 |
| jaw skeleton | 1.45e-17 | 4 |
| splanchnocranium | 1.45e-17 | 4 |
| mucosa of oral region | 1.57e-17 | 4 |
| respiratory system mucosa | 1.57e-17 | 4 |
Showing 1 to 10 of 29 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 3.13e-11 | 14 |
Showing 1 to 1 of 1 entries
