FFCP PHASE1:Hg19::chr19:18499913..18499928,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:18499913..18499928,+ to FFCP PHASE1:Hg19::chr19:18499913..18499928,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:18499913..18499928,+ | |||
|description=CAGE_peak_at_chr19:18499913..18499928,+ | |||
|id=chr19:18499913..18499928,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.44e-11!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.97e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.05e-12!143;DOID:305!7.12e-12!106;DOID:14566!2.16e-11!239;DOID:120!2.75e-11!27;DOID:162!3.47e-11!235;DOID:193!4.17e-11!29;DOID:2394!1.00e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:120;1.48e-13;27!DOID:193;1.95e-12;29!DOID:2394;1.21e-09;14!DOID:299;4.12e-08;25!DOID:1909;4.94e-08;2!DOID:3493;8.48e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.24e-15,143;DOID:120,2.00e-13,27;DOID:193,2.58e-12,29;DOID:14566,3.27e-12,239;DOID:162,7.79e-12,235;DOID:305,1.10e-11,106;DOID:2394,1.74e-09,14;DOID:299,2.77e-08,25;DOID:1909,4.97e-08,2;DOID:3493,2.83e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003886!3.57e-10!63;UBERON:0002323!1.85e-09!46;UBERON:0004458!5.89e-09!49;UBERON:0000464!9.85e-09!104;UBERON:0002553!1.15e-08!70;UBERON:0000466!3.98e-08!126;UBERON:0005156!4.45e-08!59;UBERON:0000990!4.45e-08!59;UBERON:0000992!1.24e-07!13;UBERON:0003134!2.86e-07!37;UBERON:0000474!2.86e-07!37;UBERON:0003100!4.13e-07!41;UBERON:0004176!5.46e-07!22;UBERON:0009569!6.07e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.83e-10;13!UBERON:0000474;2.53e-10;37!UBERON:0000991;4.19e-10;21!UBERON:0003100;1.26e-09;41!UBERON:0003134;1.89e-09;33!UBERON:0003133;1.22e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003134,1.23e-12,37;UBERON:0000474,1.23e-12,37;UBERON:0003133,2.94e-12,48;UBERON:0003100,4.33e-11,41;UBERON:0005156,1.08e-10,59;UBERON:0000990,1.08e-10,59;UBERON:0000992,1.92e-10,13;UBERON:0000991,3.50e-10,21;UBERON:0009196,3.50e-10,21;UBERON:0009117,3.50e-10,21;UBERON:0005564,3.50e-10,21;UBERON:0004176,1.21e-09,22;UBERON:0002323,7.12e-07,46 | |||
|phase1_expression=0.726713517082227,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,2.32575083252396,3.5576626268671,0,1.20848795132744,4.56163263431108,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.379891534993739,0.529636723252875,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0.37223371266318,0.168776332241266,0,0,0.276149695926898,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,1.62904152655162,0,0,0,0,3.46479474626577,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0.381988425558278,0,1.71072446022705,0,0,0,0.448524337381443,0.43596006883328,0,1.42198887333556,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,1.76221041716467,0.343143423810856,0,0,0,0,1.66435439510497,0,1.48864684691266,1.53461973288062,0.561320188866147,1.15325234330131,2.04682899626681,0.160853921143607,0,0,0,0,0.519254429183621,0,0.362578348774867,0,0.184161977871793,0.34444334449382,0,0.393373244878272,3.15839729035188,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.510281115829547,0,0,0.270946437543853,0,2.29388645740534,0,0.223874754722178,0,0,0.256450125116389,0,0.650756789328606,0.824328093181778,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0,0.0890320356467374,0.661139661443912,0,0.127612712494584,0.30347334256665,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0.372158369359667,0.949138274156178,0.190630193923825,0.255897791311334,0,0.318203247925937,0,1.79872457583315,0.823611089208164,0.235624804691373,0,0,0,0.48763373908959,0,1.05650146756755,0.272999822815972,0.707027159768564,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0.123084805461069,0.622079175323615,0,1.43216939740487,0,0.591860433821602,0,0,0,0,0,0.260427761085233,0.262379999988587,0.724999575434793,0.796554137998498,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,1.41620002574687,0.557694977114413,0,2.96249345202203,0,0.897576444097721,0.108647371922008,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0.843992258112108,7.34547636716165,1.41353071433941,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0.664653872707185,1.323967823502,0.313932918407225,0,1.42304773014896,2.77349346026277,1.38847790668105,0.783939179315021,0,0,1.20390222730132,0,0.0730893170861856,0,0,0.353024506766001,0,5.61871891051679,0,0,0.391102765469606,0.0801588202515337,0,0.19980960958213,2.16135625731159,0,1.88754497648161,0.720273989940749,0.372757606696298,0,0.407712618220842,0.627617077873999,0.509991088181609,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0.164831716762333,0.337017719270924,7.18520615057666,0,0,0,0,0,0,0,0,0,0.335434687599266,0.157611414598396,0.209818352539992,0,0,0.575745591958336,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0,0,0,0,0,1.19760786519031,0,0,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.74988244777264,24.7188061592886,34.2558400253961,7.52850623034149,0,0,0.447764408660622,0.233713309847224,0,0.757612021100357,0.50313580350515,1.77962244319307,9.38244280427387,0.302461847526478,0.15543720058278,0.147855149989634,1.11507737014592,3.14862178514523,0.310525913752519,0.414706207840855,0.797525143673985,1.04349012362347,0.450772826991655,0,0.813741466409323,2.18218391043071,1.28892668450986,0.464033759878494,1.59238355479446,0,1.03018711554838,0.673498977531838,0,0.385239660814607,0.857766365499703,0.260994291965212,0,0,0.244736704506468,0.358177682162975,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,3.93131818615695,0.245772908753719,1.47918486351039,0,0,0.1722149796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| 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| ||
|short_description=p@chr19:18499913..18499928,+ | |||
}} | }} |
Latest revision as of 05:11, 26 July 2015
Short description: | p@chr19:18499913..18499928, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18499913..18499928, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.97e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ | 1.23e-12 | 37 |
female reproductive system | 1.23e-12 | 37 |
reproductive organ | 2.94e-12 | 48 |
female organism | 4.33e-11 | 41 |
reproductive structure | 1.08e-10 | 59 |
reproductive system | 1.08e-10 | 59 |
female gonad | 1.92e-10 | 13 |
gonad | 3.50e-10 | 21 |
indifferent external genitalia | 3.50e-10 | 21 |
indifferent gonad | 3.50e-10 | 21 |
gonad primordium | 3.50e-10 | 21 |
external genitalia | 1.21e-09 | 22 |
body cavity | 7.12e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.24e-15 | 143 |
female reproductive organ cancer | 2.00e-13 | 27 |
reproductive organ cancer | 2.58e-12 | 29 |
disease of cellular proliferation | 3.27e-12 | 239 |
cancer | 7.79e-12 | 235 |
carcinoma | 1.10e-11 | 106 |
ovarian cancer | 1.74e-09 | 14 |
adenocarcinoma | 2.77e-08 | 25 |
melanoma | 4.97e-08 | 2 |
signet ring cell adenocarcinoma | 2.83e-07 | 2 |