FFCP PHASE1:Hg19::chr19:2330754..2330756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:2330754..2330756,- | |||
|description=CAGE_peak_at_chr19:2330754..2330756,- | |description=CAGE_peak_at_chr19:2330754..2330756,- | ||
|id=chr19:2330754..2330756,- | |id=chr19:2330754..2330756,- | ||
|ontology_enrichment_celltype=CL:0002178!2.12e-18!3;CL:0002253!6.58e-08!2 | |ontology_enrichment_celltype=CL:0002178!2.12e-18!3;CL:0002253!6.58e-08!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3493!1.60e-27!2;DOID:4929!2.74e-27!2;DOID:299!2.34e-25!25;DOID:3119!1.58e-23!14;DOID:305!2.28e-11!106;DOID:0050687!4.03e-08!143 | |ontology_enrichment_disease=DOID:3493!1.60e-27!2;DOID:4929!2.74e-27!2;DOID:299!2.34e-25!25;DOID:3119!1.58e-23!14;DOID:305!2.28e-11!106;DOID:0050687!4.03e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2 | |ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,4.32e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!8.77e-29!35;UBERON:0000160!9.51e-17!27;UBERON:0000945!1.56e-15!8;UBERON:0010039!1.56e-15!8;UBERON:0004913!1.23e-14!1;UBERON:0003703!1.23e-14!1;UBERON:0001174!1.23e-14!1;UBERON:0004914!1.23e-14!1;UBERON:0001052!2.76e-14!4;UBERON:0004907!1.28e-11!5;UBERON:0000059!1.42e-11!11;UBERON:0004921!4.45e-09!129;UBERON:0004185!4.45e-09!129;UBERON:0001007!5.33e-09!155;UBERON:0001555!5.33e-09!155;UBERON:0007026!5.33e-09!155;UBERON:0002108!1.78e-08!14;UBERON:0004119!3.81e-08!169;UBERON:0000925!3.81e-08!169;UBERON:0006595!3.81e-08!169;UBERON:0001155!7.21e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!8.77e-29!35;UBERON:0000160!9.51e-17!27;UBERON:0000945!1.56e-15!8;UBERON:0010039!1.56e-15!8;UBERON:0004913!1.23e-14!1;UBERON:0003703!1.23e-14!1;UBERON:0001174!1.23e-14!1;UBERON:0004914!1.23e-14!1;UBERON:0001052!2.76e-14!4;UBERON:0004907!1.28e-11!5;UBERON:0000059!1.42e-11!11;UBERON:0004921!4.45e-09!129;UBERON:0004185!4.45e-09!129;UBERON:0001007!5.33e-09!155;UBERON:0001555!5.33e-09!155;UBERON:0007026!5.33e-09!155;UBERON:0002108!1.78e-08!14;UBERON:0004119!3.81e-08!169;UBERON:0000925!3.81e-08!169;UBERON:0006595!3.81e-08!169;UBERON:0001155!7.21e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;3.26e-11;5!UBERON:0010039;3.26e-11;5!UBERON:0005409;1.17e-09;22!UBERON:0004921;3.69e-07;33!UBERON:0001155;8.37e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000945;3.26e-11;5!UBERON:0010039;3.26e-11;5!UBERON:0005409;1.17e-09;22!UBERON:0004921;3.69e-07;33!UBERON:0001155;8.37e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.11e-08,25;UBERON:0000945,1.59e-07,8;UBERON:0010039,1.59e-07,8;UBERON:0001155,8.37e-07,9 | |||
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|short_description=p@chr19:2330754..2330756,- | |short_description=p@chr19:2330754..2330756,- | ||
}} | }} |
Latest revision as of 05:49, 26 July 2015
Short description: | p@chr19:2330754..2330756, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:2330754..2330756, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.11e-08 | 25 |
stomach | 1.59e-07 | 8 |
food storage organ | 1.59e-07 | 8 |
colon | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.32e-26 | 2 |