FFCP PHASE1:Hg19::chr19:49118067..49118079,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49118067..49118079,- | |||
|description=CAGE_peak_at_chr19:49118067..49118079,- | |description=CAGE_peak_at_chr19:49118067..49118079,- | ||
|id=chr19:49118067..49118079,- | |id=chr19:49118067..49118079,- | ||
|ontology_enrichment_celltype=CL:0002076!5.07e-12!43;CL:0000066!1.15e-08!254;CL:0000223!1.37e-08!59;CL:0002368!1.70e-07!13 | |ontology_enrichment_celltype=CL:0002076!5.07e-12!43;CL:0000066!1.15e-08!254;CL:0000223!1.37e-08!59;CL:0002368!1.70e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000575;2.33e-12;2!CL:0002178;1.02e-08;3 | |ontology_enrichment_celltype_v019=CL:0000575;2.33e-12;2!CL:0002178;1.02e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000575,3.12e-12,2;CL:0002178,9.40e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.90e-08;1!UBERON:0001045;1.85e-07;1!UBERON:0006595;1.89e-07;86 | |ontology_enrichment_development_v019=UBERON:0006242;9.90e-08;1!UBERON:0001045;1.85e-07;1!UBERON:0006595;1.89e-07;86 | ||
|ontology_enrichment_disease=DOID:305!9.17e-13!106;DOID:299!1.41e-10!25;DOID:0050687!2.05e-07!143;DOID:1749!6.99e-07!14 | |ontology_enrichment_disease=DOID:305!9.17e-13!106;DOID:299!1.41e-10!25;DOID:0050687!2.05e-07!143;DOID:1749!6.99e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.22e-12;2!DOID:3111;5.18e-07;1!DOID:3603;5.18e-07;1!DOID:3119;6.37e-07;14 | |ontology_enrichment_disease_v019=DOID:3493;1.22e-12;2!DOID:3111;5.18e-07;1!DOID:3603;5.18e-07;1!DOID:3119;6.37e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.02e-12,2;DOID:3111,4.08e-07,1;DOID:3603,4.08e-07,1;DOID:3119,6.64e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.99e-17!169;UBERON:0000925!1.99e-17!169;UBERON:0006595!1.99e-17!169;UBERON:0001007!7.76e-16!155;UBERON:0001555!7.76e-16!155;UBERON:0007026!7.76e-16!155;UBERON:0004921!2.29e-15!129;UBERON:0004185!2.29e-15!129;UBERON:0005409!1.06e-13!35;UBERON:0000160!5.27e-12!27;UBERON:0002294!6.75e-12!7;UBERON:0001173!6.75e-12!7;UBERON:0004912!6.75e-12!7;UBERON:0000077!4.84e-11!130;UBERON:0001004!2.31e-08!72;UBERON:0002110!4.64e-08!3;UBERON:0006242!4.64e-08!3;UBERON:0000059!7.00e-08!11;UBERON:0000464!1.82e-07!104;UBERON:0000065!3.64e-07!53;UBERON:0001041!4.22e-07!98;UBERON:0000466!4.24e-07!126 | |ontology_enrichment_uberon=UBERON:0004119!1.99e-17!169;UBERON:0000925!1.99e-17!169;UBERON:0006595!1.99e-17!169;UBERON:0001007!7.76e-16!155;UBERON:0001555!7.76e-16!155;UBERON:0007026!7.76e-16!155;UBERON:0004921!2.29e-15!129;UBERON:0004185!2.29e-15!129;UBERON:0005409!1.06e-13!35;UBERON:0000160!5.27e-12!27;UBERON:0002294!6.75e-12!7;UBERON:0001173!6.75e-12!7;UBERON:0004912!6.75e-12!7;UBERON:0000077!4.84e-11!130;UBERON:0001004!2.31e-08!72;UBERON:0002110!4.64e-08!3;UBERON:0006242!4.64e-08!3;UBERON:0000059!7.00e-08!11;UBERON:0000464!1.82e-07!104;UBERON:0000065!3.64e-07!53;UBERON:0001041!4.22e-07!98;UBERON:0000466!4.24e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;6.47e-42;22!UBERON:0000160;4.08e-32;17!UBERON:0004921;4.64e-24;33!UBERON:0000059;1.77e-19;11!UBERON:0002108;9.56e-12;4!UBERON:0004907;2.17e-11;5!UBERON:0000945;2.37e-11;5!UBERON:0010039;2.37e-11;5!UBERON:0001155;3.32e-11;9!UBERON:0001555;4.78e-09;54!UBERON:0002110;5.40e-09;3!UBERON:0001007;1.48e-08;81!UBERON:0002294;2.84e-08;7!UBERON:0001173;2.84e-08;7!UBERON:0001154;1.85e-07;1!UBERON:0001153;1.85e-07;1!UBERON:0009854;1.85e-07;1!UBERON:0002171;2.67e-07;1!UBERON:0006518;2.67e-07;1!UBERON:0008949;2.67e-07;1!UBERON:0000101;2.67e-07;1!UBERON:0002167;2.67e-07;1!UBERON:0001052;7.31e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005409;6.47e-42;22!UBERON:0000160;4.08e-32;17!UBERON:0004921;4.64e-24;33!UBERON:0000059;1.77e-19;11!UBERON:0002108;9.56e-12;4!UBERON:0004907;2.17e-11;5!UBERON:0000945;2.37e-11;5!UBERON:0010039;2.37e-11;5!UBERON:0001155;3.32e-11;9!UBERON:0001555;4.78e-09;54!UBERON:0002110;5.40e-09;3!UBERON:0001007;1.48e-08;81!UBERON:0002294;2.84e-08;7!UBERON:0001173;2.84e-08;7!UBERON:0001154;1.85e-07;1!UBERON:0001153;1.85e-07;1!UBERON:0009854;1.85e-07;1!UBERON:0002171;2.67e-07;1!UBERON:0006518;2.67e-07;1!UBERON:0008949;2.67e-07;1!UBERON:0000101;2.67e-07;1!UBERON:0002167;2.67e-07;1!UBERON:0001052;7.31e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.00e-36,25;UBERON:0000160,4.99e-32,17;UBERON:0000059,1.92e-19,11;UBERON:0001007,7.30e-17,145;UBERON:0001555,7.30e-17,145;UBERON:0007026,7.30e-17,145;UBERON:0004119,2.13e-16,160;UBERON:0000925,2.13e-16,160;UBERON:0006595,2.13e-16,160;UBERON:0004921,7.37e-16,118;UBERON:0002108,1.05e-11,4;UBERON:0004907,2.46e-11,5;UBERON:0001155,3.16e-11,9;UBERON:0002110,4.42e-09,3;UBERON:0006242,4.42e-09,3;UBERON:0001154,1.74e-07,1;UBERON:0001153,1.74e-07,1;UBERON:0001045,1.74e-07,1;UBERON:0002171,2.67e-07,1;UBERON:0006518,2.67e-07,1;UBERON:0008949,2.67e-07,1;UBERON:0000101,2.67e-07,1;UBERON:0002167,2.67e-07,1;UBERON:0000945,2.78e-07,8;UBERON:0010039,2.78e-07,8;UBERON:0011216,3.26e-07,223;UBERON:0001052,8.34e-07,4 | |||
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| ||
|short_description=p@chr19:49118067..49118079,- | |short_description=p@chr19:49118067..49118079,- | ||
}} | }} |
Latest revision as of 15:46, 27 July 2015
Short description: | p@chr19:49118067..49118079, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49118067..49118079, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 3.12e-12 | 2 |
epithelial cell of stomach | 9.40e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.00e-36 | 25 |
intestine | 4.99e-32 | 17 |
large intestine | 1.92e-19 | 11 |
digestive system | 7.30e-17 | 145 |
digestive tract | 7.30e-17 | 145 |
primitive gut | 7.30e-17 | 145 |
endoderm-derived structure | 2.13e-16 | 160 |
endoderm | 2.13e-16 | 160 |
presumptive endoderm | 2.13e-16 | 160 |
subdivision of digestive tract | 7.37e-16 | 118 |
small intestine | 1.05e-11 | 4 |
lower digestive tract | 2.46e-11 | 5 |
colon | 3.16e-11 | 9 |
gallbladder | 4.42e-09 | 3 |
gall bladder primordium | 4.42e-09 | 3 |
vermiform appendix | 1.74e-07 | 1 |
caecum | 1.74e-07 | 1 |
midgut | 1.74e-07 | 1 |
lower lobe of right lung | 2.67e-07 | 1 |
right lung lobe | 2.67e-07 | 1 |
lower lobe of lung | 2.67e-07 | 1 |
lobe of lung | 2.67e-07 | 1 |
right lung | 2.67e-07 | 1 |
stomach | 2.78e-07 | 8 |
food storage organ | 2.78e-07 | 8 |
organ system subdivision | 3.26e-07 | 223 |
rectum | 8.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.02e-12 | 2 |
cystadenocarcinoma | 4.08e-07 | 1 |
mucinous cystadenocarcinoma | 4.08e-07 | 1 |
gastrointestinal system cancer | 6.64e-07 | 14 |