FFCP PHASE1:Hg19::chr19:9087492..9087495,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:9087492..9087495,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr19:9087492..9087495,- | |description=CAGE_peak_at_chr19:9087492..9087495,- | ||
Latest revision as of 18:45, 27 July 2015
| Short description: | p@chr19:9087492..9087495, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr19:9087492..9087495, - |
| Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr19:9087492..9087495- |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| amnion mesenchymal stem cell | 3.74e-53 | 5 |
| extraembryonic cell | 5.66e-15 | 19 |
| epithelial cell of uterus | 2.19e-12 | 6 |
| stromal cell of endometrium | 2.19e-12 | 6 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| amnion | 2.18e-38 | 7 |
| somatic layer of lateral plate mesoderm | 9.08e-34 | 8 |
| extraembryonic membrane | 7.13e-20 | 14 |
| membranous layer | 7.13e-20 | 14 |
| extraembryonic structure | 4.20e-12 | 24 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| female reproductive endometrioid cancer | 2.19e-12 | 6 |
Showing 1 to 1 of 1 entries
