FFCP PHASE1:Hg19::chr1:198665947..198665962,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5788 | |EntrezGene=entrezgene:5788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=9666 | |HGNC=HGNC:9666 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000484135_5end | |association_with_transcript=-47bp_to_ENST00000484135_5end | ||
|cluster_id=chr1:198665947..198665962,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_8_at_PTPRC_5end | |description=CAGE_peak_8_at_PTPRC_5end | ||
Revision as of 01:57, 28 July 2015
| Short description: | p8@PTPRC |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_PTPRC_5end |
| Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
| Association with transcript: | -47bp_to_ENST00000484135_5end |
| EntrezGene: | 5788 |
| HGNC: | 9666 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p8@PTPRC |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| nongranular leukocyte | 3.89e-25 | 115 |
| leukocyte | 8.97e-23 | 136 |
| natural killer cell | 2.78e-20 | 3 |
| pro-NK cell | 2.78e-20 | 3 |
| hematopoietic lineage restricted progenitor cell | 2.02e-19 | 120 |
| hematopoietic stem cell | 1.40e-17 | 168 |
| hematopoietic cell | 1.87e-16 | 177 |
| lymphoid lineage restricted progenitor cell | 6.55e-16 | 52 |
| lymphocyte | 1.44e-15 | 53 |
| common lymphoid progenitor | 1.44e-15 | 53 |
Showing 1 to 10 of 28 entries
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 8.03e-09 | 108 |
| hematopoietic system | 1.86e-08 | 98 |
| blood island | 1.86e-08 | 98 |
| lymph node | 4.66e-08 | 1 |
| lower lobe of right lung | 1.04e-07 | 1 |
| right lung lobe | 1.04e-07 | 1 |
| lower lobe of lung | 1.04e-07 | 1 |
| lobe of lung | 1.04e-07 | 1 |
| right lung | 1.04e-07 | 1 |
| blood | 3.55e-07 | 15 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| lymphatic system cancer | 3.55e-08 | 1 |
| lymphosarcoma | 3.55e-08 | 1 |
Showing 1 to 2 of 2 entries
