FFCP PHASE1:Hg19::chr1:203148270..203148291,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:203148270..203148291,- | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_at_chr1:203148270..203148291,- | |||
|id=chr1:203148270..203148291,- | |||
|ontology_enrichment_celltype=CL:0000153!6.24e-09!9;CL:0000447!6.24e-09!9;CL:0000667!2.54e-07!6;CL:0000058!2.54e-07!6;CL:0000138!2.54e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;3.57e-22;9!CL:0000447;3.57e-22;9!CL:0000138;2.43e-17;6!CL:0000235;1.01e-16;6!CL:0000135;2.33e-13;3!CL:0000388;2.33e-13;3!CL:0000499;4.42e-13;28!CL:0000327;7.13e-13;15!CL:0002540;6.36e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.52e-22,9;CL:0000447,3.52e-22,9;CL:0000058,2.39e-17,6;CL:0000138,2.39e-17,6;CL:0000235,8.97e-17,6;CL:0000135,2.42e-13,3;CL:0000388,2.42e-13,3;CL:0000499,4.45e-13,28;CL:0000327,7.07e-13,15;CL:0002540,6.29e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.93e-13!115;UBERON:0001049!2.26e-09!57;UBERON:0005068!2.26e-09!57;UBERON:0006241!2.26e-09!57;UBERON:0007135!2.26e-09!57;UBERON:0002020!4.35e-09!34;UBERON:0003528!4.35e-09!34;UBERON:0001017!2.34e-08!82;UBERON:0005743!3.30e-08!86;UBERON:0000073!5.44e-08!94;UBERON:0001016!5.44e-08!94;UBERON:0002298!6.62e-08!8;UBERON:0002616!3.41e-07!59;UBERON:0002791!4.12e-07!33;UBERON:0001893!8.65e-07!34;UBERON:0003075!9.45e-07!86;UBERON:0007284!9.45e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.33e-13;3!UBERON:0000043;2.33e-13;3!UBERON:0007845;2.33e-13;3!UBERON:0000125;7.90e-07;9!UBERON:0002308;7.90e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.42e-13,3;UBERON:0000043,2.42e-13,3;UBERON:0007845,2.42e-13,3;UBERON:0000125,8.15e-07,9;UBERON:0002308,8.15e-07,9 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0,50.2400421814547,13.536123587169,48.5235838518759,15.1104329939709,10.2193322763554,0,0,0.175669571386252,0,0,0,0,0.174129737299267,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7767538168091,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,1.96973604869918,20.1243668019744,9.36376322418988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,13.378615870531,0,37.9501091069457,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,3.86644406388848,0,3.18969375826582,5.99205619157746,5.9832291840805,0.828831026872071,0,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0.907170879989041,0,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.739144404124282,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,1.07834031980251,1.22802939780904,0,0.107420244868274,0.580066775656914,0.0852266274161009,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,57.84349207156,60.9195551975818,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0.313359791546046,0,0,0,0,0,1.03051603426729,6.75929681478608,2.68411329470899,2.83643540910244,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,1.5677537021303,0,0,0,0,0,0,0,14.6985252042632,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80218005176509,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.52418000472609,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,3.17845648891671,0.600420288709789,2.0535806833799,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,1.72844298240254,0.979762080328227,0,0,0,0,6.30174604815755,0,0.904980694530854,3.30581504356725,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0.573409195690071,2.88415533995816,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,5.54805861502613,20.4555245697096,112.199284181648,41.8211274150372,0.457680136793847,2.11723293268535,0,0.147855149989634,0,0.899606224327209,0,0,0,0,3.15540978894159,0,0,0,0.322231671127465,0.464033759878494,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0.926404341482917,2.41212454536578,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798169295285756,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2401207790071,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,33.9546258686089,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,4.14432328326074,0,0,0,0.828324005113957,0.681707238073262,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0,0,0,0,0,0,0,0,2.29343333042322,0,0,0,0,53.9392776341789,300.414158610422,6.05677186973305,0,0,0,0,0,0,0,0.303114792872958,0,1.65833887891756,0.20686599172379,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0,0,0.502055437748735,0,0,0.426909383510862,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:203148270..203148291,- | |||
}} |
Latest revision as of 02:23, 28 July 2015
Short description: | p@chr1:203148270..203148291, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203148270..203148291, - |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.52e-22 | 9 |
carbohydrate secreting cell | 3.52e-22 | 9 |
chondroblast | 2.39e-17 | 6 |
chondrocyte | 2.39e-17 | 6 |
macrophage | 8.97e-17 | 6 |
fibrocyte | 2.42e-13 | 3 |
tendon cell | 2.42e-13 | 3 |
stromal cell | 4.45e-13 | 28 |
extracellular matrix secreting cell | 7.07e-13 | 15 |
mesenchymal stem cell of the bone marrow | 6.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.42e-13 | 3 |
tendon | 2.42e-13 | 3 |
regular connective tissue | 2.42e-13 | 3 |
neural nucleus | 8.15e-07 | 9 |
nucleus of brain | 8.15e-07 | 9 |