FFCP PHASE1:Hg19::chr1:205306210..205306228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:205306210..205306228,- | |||
|coexpression_cluster_id=C361 | |||
|description=CAGE_peak_at_chr1:205306210..205306228,- | |description=CAGE_peak_at_chr1:205306210..205306228,- | ||
|id=chr1:205306210..205306228,- | |id=chr1:205306210..205306228,- | ||
|ontology_enrichment_celltype=CL:0000047!1.04e-13!8;CL:0002319!2.47e-08!25 | |ontology_enrichment_celltype=CL:0000047!1.04e-13!8;CL:0002319!2.47e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000047;9.38e-99;2!CL:0002319;2.06e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.81e-26,8;CL:0002319,2.06e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.27e-23!94;UBERON:0001016!8.27e-23!94;UBERON:0005743!2.65e-20!86;UBERON:0001017!6.78e-19!82;UBERON:0007023!1.54e-14!115;UBERON:0001049!1.06e-13!57;UBERON:0005068!1.06e-13!57;UBERON:0006241!1.06e-13!57;UBERON:0007135!1.06e-13!57;UBERON:0004121!1.79e-12!169;UBERON:0000924!4.28e-12!173;UBERON:0006601!4.28e-12!173;UBERON:0002616!5.98e-11!59;UBERON:0000955!9.24e-11!69;UBERON:0006238!9.24e-11!69;UBERON:0003076!1.02e-10!15;UBERON:0003057!1.02e-10!15;UBERON:0003075!5.11e-10!86;UBERON:0007284!5.11e-10!86;UBERON:0002346!1.80e-09!90;UBERON:0001896!2.12e-09!3;UBERON:0005290!2.12e-09!3;UBERON:0010096!2.12e-09!3;UBERON:0004733!7.53e-09!12;UBERON:0002028!7.53e-09!12;UBERON:0007277!7.53e-09!12;UBERON:0004732!3.54e-08!13;UBERON:0002298!8.83e-08!8;UBERON:0003296!9.11e-08!4;UBERON:0010133!9.11e-08!4;UBERON:0002336!1.54e-07!1;UBERON:0001018!1.54e-07!1;UBERON:0002473!1.54e-07!1;UBERON:0005340!1.54e-07!1;UBERON:0002316!1.54e-07!1;UBERON:0003544!1.54e-07!1;UBERON:0001020!1.54e-07!1;UBERON:0005970!1.54e-07!1;UBERON:0002437!1.54e-07!1;UBERON:0001882!1.75e-07!1;UBERON:0005403!1.75e-07!1;UBERON:0002022!1.99e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.18e-26;2!UBERON:0002757;9.18e-26;2!UBERON:0010134;9.18e-26;2!UBERON:0005408;9.18e-26;2!UBERON:0001899;9.18e-26;2!UBERON:0003296;1.29e-13;4!UBERON:0010133;1.29e-13;4!UBERON:0002784;1.29e-13;4!UBERON:0001894;2.35e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7 | |||
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|short_description=p@chr1:205306210..205306228,- | |short_description=p@chr1:205306210..205306228,- | ||
}} | }} |
Latest revision as of 02:45, 28 July 2015
Short description: | p@chr1:205306210..205306228, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:205306210..205306228, - |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.81e-26 | 8 |
neural cell | 2.06e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.18e-26 | 2 |
regional part of epithalamus | 9.18e-26 | 2 |
secretory circumventricular organ | 9.18e-26 | 2 |
circumventricular organ | 9.18e-26 | 2 |
epithalamus | 9.18e-26 | 2 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
regional part of diencephalon | 1.29e-13 | 4 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |