FFCP PHASE1:Hg19::chr1:209788637..209788653,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209788637..209788653,- | |||
|description=CAGE_peak_at_chr1:209788637..209788653,- | |description=CAGE_peak_at_chr1:209788637..209788653,- | ||
|id=chr1:209788637..209788653,- | |id=chr1:209788637..209788653,- | ||
|ontology_enrichment_celltype=CL:0000066!3.75e-23!254;CL:0002076!3.57e-20!43;CL:0000223!1.12e-15!59;CL:0002368!9.92e-13!13;CL:0002159!7.99e-10!13;CL:0000244!1.34e-09!4;CL:0000731!1.34e-09!4;CL:0002621!7.43e-08!3;CL:0000063!9.86e-08!578;CL:0000239!2.24e-07!3;CL:1000615!2.24e-07!3;CL:0002306!2.24e-07!3;CL:0002231!7.61e-07!3;CL:0002077!7.94e-07!33;CL:0002541!8.76e-07!3 | |ontology_enrichment_celltype=CL:0000066!3.75e-23!254;CL:0002076!3.57e-20!43;CL:0000223!1.12e-15!59;CL:0002368!9.92e-13!13;CL:0002159!7.99e-10!13;CL:0000244!1.34e-09!4;CL:0000731!1.34e-09!4;CL:0002621!7.43e-08!3;CL:0000063!9.86e-08!578;CL:0000239!2.24e-07!3;CL:1000615!2.24e-07!3;CL:0002306!2.24e-07!3;CL:0002231!7.61e-07!3;CL:0002077!7.94e-07!33;CL:0002541!8.76e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;4.52e-20;3!CL:0002368;1.61e-17;13!CL:0002159;3.57e-16;14!CL:0000244;4.66e-16;4!CL:0000731;4.66e-16;4!CL:0002076;7.11e-15;42!CL:0000575;3.54e-14;2!CL:0002536;4.17e-14;2!CL:0000307;1.06e-09;3!CL:0002252;3.31e-08;1!CL:0002077;2.43e-07;34!CL:0002327;2.75e-07;4!CL:0002202;3.42e-07;9!CL:0002632;3.42e-07;9!CL:0000362;5.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.00e-20,3;CL:0002368,1.30e-17,13;CL:0002076,7.53e-17,42;CL:0000244,4.79e-16,4;CL:0000731,4.79e-16,4;CL:0002159,7.11e-16,14;CL:0000066,4.12e-15,253;CL:0002536,3.43e-14,2;CL:0000575,6.20e-14,2;CL:0000223,6.73e-14,58;CL:0000068,1.21e-09,3;CL:0000069,1.21e-09,3;CL:0000307,1.21e-09,3;CL:0000377,1.21e-09,3;CL:0002077,2.24e-08,34;CL:0002252,3.32e-08,1;CL:0002202,3.65e-07,9;CL:0002632,3.65e-07,9;CL:0002327,3.78e-07,4;CL:0002321,4.12e-07,250;CL:0000362,6.97e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.06e-09;3!CL:0000223;1.01e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.40e-11!169;UBERON:0000925!6.40e-11!169;UBERON:0006595!6.40e-11!169;UBERON:0000365!7.15e-11!5;UBERON:0005910!5.67e-09!6;UBERON:0005911!9.70e-09!82;UBERON:0005631!2.59e-08!14;UBERON:0000158!2.59e-08!14;UBERON:0006554!4.78e-08!44;UBERON:0001949!7.43e-08!3;UBERON:0001008!8.79e-08!45;UBERON:0006853!2.24e-07!3;UBERON:0007685!2.24e-07!3;UBERON:0004134!2.24e-07!3;UBERON:0000476!8.76e-07!3;UBERON:0000920!8.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.52e-20;3!UBERON:0000486;1.63e-19;12!UBERON:0000365;5.97e-13;5!UBERON:0005910;7.14e-11;6!UBERON:0005631;1.57e-10;10!UBERON:0000158;1.57e-10;10!UBERON:0000305;6.64e-09;7!UBERON:0003929;6.64e-09;7!UBERON:0003350;7.56e-08;8!UBERON:0001828;7.56e-08;8!UBERON:0000964;1.62e-07;4!UBERON:0010409;1.62e-07;4!UBERON:0005911;2.06e-07;36!UBERON:0001911;2.75e-07;4!UBERON:0010371;7.62e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.00e-20,3;UBERON:0000365,6.10e-13,5;UBERON:0005910,7.28e-11,6;UBERON:0000305,5.89e-09,7;UBERON:0003350,5.63e-08,8;UBERON:0001828,5.63e-08,8;UBERON:0004871,6.81e-08,8;UBERON:0005631,1.29e-07,14;UBERON:0000158,1.29e-07,14;UBERON:0000964,2.13e-07,4;UBERON:0010409,2.13e-07,4;UBERON:0004348,2.13e-07,4;UBERON:0005427,2.13e-07,4;UBERON:0001911,3.78e-07,4;UBERON:0005333,3.78e-07,4;UBERON:0008425,3.78e-07,4;UBERON:0005311,3.78e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,1.39560233594486,3.71350332621293,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,6.28581817283539,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.575384784644301,0,0,0,0,0,0,0,0.449446968890169,0,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37154345951051,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.63647672354501,3.72845974005705,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,2.24803506515239,1.10581869652794,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,1.17587489739202,0.708875486211932,1.25381931783988,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,1.40354529212299,0.828728900423067,0,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,1.78413391131527,0.831076008928724,0.671624264166535,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,1.81813406897076,1.92190067365106,1.14851441245126,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,0,3.26672954583968,0,11.6236450621232,11.7930032967338,3.54744122829341,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0,0.638002319463839,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.391969589657511,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0.0802413666891683,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,1.39560233594486,3.71350332621293,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,6.28581817283539,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.575384784644301,0,0,0,0,0,0,0,0.449446968890169,0,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37154345951051,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.63647672354501,3.72845974005705,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,2.24803506515239,1.10581869652794,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,1.17587489739202,0.708875486211932,1.25381931783988,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,1.40354529212299,0.828728900423067,0,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,1.78413391131527,0.831076008928724,0.671624264166535,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,1.81813406897076,1.92190067365106,1.14851441245126,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,0,3.26672954583968,0,11.6236450621232,11.7930032967338,3.54744122829341,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0,0,0.638002319463839,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.391969589657511,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0.0802413666891683,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:209788637..209788653,- | |short_description=p@chr1:209788637..209788653,- | ||
}} | }} |
Latest revision as of 03:19, 28 July 2015
Short description: | p@chr1:209788637..209788653, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209788637..209788653, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.00e-20 | 3 |
respiratory epithelial cell | 1.30e-17 | 13 |
endo-epithelial cell | 7.53e-17 | 42 |
transitional epithelial cell | 4.79e-16 | 4 |
urothelial cell | 4.79e-16 | 4 |
general ecto-epithelial cell | 7.11e-16 | 14 |
epithelial cell | 4.12e-15 | 253 |
amniotic epithelial cell | 3.43e-14 | 2 |
corneal epithelial cell | 6.20e-14 | 2 |
endodermal cell | 6.73e-14 | 58 |
duct epithelial cell | 1.21e-09 | 3 |
branched duct epithelial cell | 1.21e-09 | 3 |
tracheal epithelial cell | 1.21e-09 | 3 |
tracheoblast | 1.21e-09 | 3 |
ecto-epithelial cell | 2.24e-08 | 34 |
epithelial cell of esophagus | 3.32e-08 | 1 |
epithelial cell of tracheobronchial tree | 3.65e-07 | 9 |
epithelial cell of lower respiratory tract | 3.65e-07 | 9 |
mammary gland epithelial cell | 3.78e-07 | 4 |
embryonic cell | 4.12e-07 | 250 |
epidermal cell | 6.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.00e-20 | 3 |
urothelium | 6.10e-13 | 5 |
transitional epithelium | 7.28e-11 | 6 |
amnion | 5.89e-09 | 7 |
epithelium of mucosa | 5.63e-08 | 8 |
gingiva | 5.63e-08 | 8 |
somatic layer of lateral plate mesoderm | 6.81e-08 | 8 |
extraembryonic membrane | 1.29e-07 | 14 |
membranous layer | 1.29e-07 | 14 |
cornea | 2.13e-07 | 4 |
eye surface | 2.13e-07 | 4 |
optic eminence | 2.13e-07 | 4 |
corneal primordium | 2.13e-07 | 4 |
mammary gland | 3.78e-07 | 4 |
mammary bud | 3.78e-07 | 4 |
mammary ridge | 3.78e-07 | 4 |
mammary placode | 3.78e-07 | 4 |