FFCP PHASE1:Hg19::chr1:53898616..53898638,+: Difference between revisions
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|id=chr1:53898616..53898638,+
|short_description=p@chr1:53898616..53898638,+
|description=CAGE_peak_at_chr1:53898616..53898638,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:53898616..53898638,+ | |||
|coexpression_cluster_id=C3987 | |||
|description=CAGE_peak_at_chr1:53898616..53898638,+ | |||
|id=chr1:53898616..53898638,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.18e-71!5;CL:0000148!1.54e-13!10;CL:0000541!1.54e-13!10;CL:0000147!7.71e-10!14;CL:0000710!4.81e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.86e-98;5!CL:0002321;4.67e-33;15!CL:0000148;1.73e-18;10!CL:0000147;2.07e-13;14!CL:0000710;1.40e-09;20!CL:0000075;3.02e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.12e-98,5;CL:0000148,1.63e-18,10;CL:0000541,1.63e-18,10;CL:0000147,1.98e-13,14;CL:0000710,1.36e-09,20;CL:0000075,2.96e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!1.20e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.82e-11,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.62e-12;49!UBERON:0002114;6.56e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,6.78e-08,2 | |||
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|short_description=p@chr1:53898616..53898638,+ | |||
}} | }} |
Latest revision as of 09:09, 28 July 2015
Short description: | p@chr1:53898616..53898638, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:53898616..53898638, + |
Coexpression cluster: | C3987_signet_HES3GFP_H9_duodenum_temporal_rhabdomyosarcoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.12e-98 | 5 |
melanocyte | 1.63e-18 | 10 |
melanoblast | 1.63e-18 | 10 |
pigment cell | 1.98e-13 | 14 |
neurecto-epithelial cell | 1.36e-09 | 20 |
columnar/cuboidal epithelial cell | 2.96e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
duodenum | 6.78e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.82e-11 | 2 |