FFCP PHASE1:Hg19::chr1:81001373..81001388,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_ENST00000418041,ENST00000443104_5end | |association_with_transcript=-51bp_to_ENST00000418041,ENST00000443104_5end | ||
|cluster_id=chr1:81001373..81001388,+ | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_2_at_ENST00000418041_5end,CAGE_peak_2_at_ENST00000443104_5end | |description=CAGE_peak_2_at_ENST00000418041_5end,CAGE_peak_2_at_ENST00000443104_5end | ||
|id=chr1:81001373..81001388,+ | |id=chr1:81001373..81001388,+ | ||
|ontology_enrichment_celltype=CL:1000507!1.44e-57!12;CL:1000494!1.44e-57!12;CL:1000497!7.47e-57!18;CL:0002518!7.47e-57!18;CL:1000449!6.70e-43!16;CL:0002681!1.40e-23!13;CL:0002584!1.40e-23!13;CL:0000650!1.05e-12!3;CL:1000618!1.05e-12!3;CL:1001318!1.05e-12!3;CL:0002173!1.05e-12!3;CL:1000500!1.05e-12!3;CL:0000239!1.68e-12!3;CL:1000615!1.68e-12!3;CL:0002306!1.68e-12!3;CL:0000669!5.69e-08!5;CL:0000066!5.15e-07!254 | |ontology_enrichment_celltype=CL:1000507!1.44e-57!12;CL:1000494!1.44e-57!12;CL:1000497!7.47e-57!18;CL:0002518!7.47e-57!18;CL:1000449!6.70e-43!16;CL:0002681!1.40e-23!13;CL:0002584!1.40e-23!13;CL:0000650!1.05e-12!3;CL:1000618!1.05e-12!3;CL:1001318!1.05e-12!3;CL:0002173!1.05e-12!3;CL:1000500!1.05e-12!3;CL:0000239!1.68e-12!3;CL:1000615!1.68e-12!3;CL:0002306!1.68e-12!3;CL:0000669!5.69e-08!5;CL:0000066!5.15e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.04e-35;10!CL:1000494;2.04e-35;10!CL:1000497;2.59e-32;17!CL:0002518;2.59e-32;17!CL:1000449;8.21e-24;15!CL:0000650;1.96e-12;2!CL:1000500;1.96e-12;2!CL:1000618;1.96e-12;2!CL:1001318;1.96e-12;2!CL:0002173;1.96e-12;2!CL:0000669;7.48e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.13e-35,10;CL:1000494,2.13e-35,10;CL:1000497,2.68e-32,17;CL:0002518,2.68e-32,17;CL:1000449,8.45e-24,15;CL:0000650,2.07e-12,2;CL:1000500,2.07e-12,2;CL:1000618,2.07e-12,2;CL:1001318,2.07e-12,2;CL:0002173,2.07e-12,2;CL:0000669,7.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.04e-20;10!UBERON:0007687;2.04e-20;10!UBERON:0003104;3.03e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;2.45e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.59e-12,2 | |||
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|short_description=p2@ENST00000418041,p2@ENST00000443104 | |short_description=p2@ENST00000418041,p2@ENST00000443104 | ||
}} | }} |
Latest revision as of 10:35, 28 July 2015
Short description: | p2@ENST00000418041, p2@ENST00000443104 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000418041_5end, CAGE_peak_2_at_ENST00000443104_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | -51bp_to_ENST00000418041, ENST00000443104_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.13e-35 | 10 |
nephron tubule epithelial cell | 2.13e-35 | 10 |
kidney cell | 2.68e-32 | 17 |
kidney epithelial cell | 2.68e-32 | 17 |
epithelial cell of nephron | 8.45e-24 | 15 |
mesangial cell | 2.07e-12 | 2 |
kidney interstitial cell | 2.07e-12 | 2 |
juxtaglomerular complex cell | 2.07e-12 | 2 |
renal interstitial pericyte | 2.07e-12 | 2 |
extraglomerular mesangial cell | 2.07e-12 | 2 |
pericyte cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
kidney | 4.42e-41 | 26 |
kidney mesenchyme | 4.42e-41 | 26 |
upper urinary tract | 4.42e-41 | 26 |
kidney rudiment | 4.42e-41 | 26 |
kidney field | 4.42e-41 | 26 |
nephron tubule epithelium | 2.13e-35 | 10 |
cavitated compound organ | 1.77e-34 | 31 |
nephron epithelium | 8.45e-24 | 15 |
renal tubule | 8.45e-24 | 15 |
nephron tubule | 8.45e-24 | 15 |
nephron | 8.45e-24 | 15 |
uriniferous tubule | 8.45e-24 | 15 |
nephrogenic mesenchyme | 8.45e-24 | 15 |
urinary system structure | 9.16e-23 | 47 |
excretory tube | 2.40e-22 | 16 |
kidney epithelium | 2.40e-22 | 16 |
renal system | 2.73e-22 | 48 |
abdomen element | 8.16e-20 | 54 |
abdominal segment element | 8.16e-20 | 54 |
abdominal segment of trunk | 7.86e-18 | 60 |
abdomen | 7.86e-18 | 60 |
compound organ | 9.98e-16 | 68 |
abdomen connective tissue | 2.07e-12 | 2 |
abdominal segment connective tissue | 2.07e-12 | 2 |
trunk connective tissue | 2.07e-12 | 2 |
interstitial tissue | 2.07e-12 | 2 |
extraglomerular mesangium | 2.07e-12 | 2 |
kidney interstitium | 2.07e-12 | 2 |
juxtaglomerular apparatus | 2.07e-12 | 2 |
mesangium | 2.07e-12 | 2 |
trunk region element | 1.50e-10 | 101 |
subdivision of trunk | 1.70e-09 | 112 |
stroma | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.59e-12 | 2 |