FFCP PHASE1:Hg19::chr20:31894723..31894752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:31894723..31894752,+ | |||
|coexpression_cluster_id=C444 | |coexpression_cluster_id=C444 | ||
|description=CAGE_peak_at_chr20:31894723..31894752,+ | |description=CAGE_peak_at_chr20:31894723..31894752,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!6.02e-30!2;UBERON:0000065!1.80e-16!53;UBERON:0002171!7.46e-16!1;UBERON:0006518!7.46e-16!1;UBERON:0008949!7.46e-16!1;UBERON:0000101!7.46e-16!1;UBERON:0002167!7.46e-16!1;UBERON:0002372!2.06e-15!1;UBERON:0001961!2.06e-15!1;UBERON:0001744!2.06e-15!1;UBERON:0001735!2.06e-15!1;UBERON:0001004!6.05e-12!72;UBERON:0005178!1.53e-10!34;UBERON:0002224!1.53e-10!34;UBERON:0005181!3.07e-10!35;UBERON:0008947!1.99e-09!38;UBERON:0003258!1.99e-09!38;UBERON:0003126!2.92e-09!7;UBERON:0001005!2.92e-09!7;UBERON:0000341!2.00e-08!2;UBERON:0007023!3.42e-07!115;UBERON:0000915!7.18e-07!52 | |ontology_enrichment_uberon=UBERON:0003127!6.02e-30!2;UBERON:0000065!1.80e-16!53;UBERON:0002171!7.46e-16!1;UBERON:0006518!7.46e-16!1;UBERON:0008949!7.46e-16!1;UBERON:0000101!7.46e-16!1;UBERON:0002167!7.46e-16!1;UBERON:0002372!2.06e-15!1;UBERON:0001961!2.06e-15!1;UBERON:0001744!2.06e-15!1;UBERON:0001735!2.06e-15!1;UBERON:0001004!6.05e-12!72;UBERON:0005178!1.53e-10!34;UBERON:0002224!1.53e-10!34;UBERON:0005181!3.07e-10!35;UBERON:0008947!1.99e-09!38;UBERON:0003258!1.99e-09!38;UBERON:0003126!2.92e-09!7;UBERON:0001005!2.92e-09!7;UBERON:0000341!2.00e-08!2;UBERON:0007023!3.42e-07!115;UBERON:0000915!7.18e-07!52 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.74e-50;2!UBERON:0003126;1.65e-15;7!UBERON:0001005;1.65e-15;7!UBERON:0007196;5.55e-08;15!UBERON:0001558;5.55e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0003127;2.74e-50;2!UBERON:0003126;1.65e-15;7!UBERON:0001005;1.65e-15;7!UBERON:0007196;5.55e-08;15!UBERON:0001558;5.55e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.74e-50,2;UBERON:0003126,1.65e-15,7;UBERON:0001005,1.65e-15,7;UBERON:0007196,5.55e-08,15;UBERON:0001558,5.55e-08,15 | |||
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|short_description=p@chr20:31894723..31894752,+ | |short_description=p@chr20:31894723..31894752,+ | ||
}} | }} |
Latest revision as of 13:07, 28 July 2015
Short description: | p@chr20:31894723..31894752, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:31894723..31894752, + |
Coexpression cluster: | C444_CD14_trachea_tonsil_tongue_throat_salivary_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.74e-50 | 2 |
trachea | 1.65e-15 | 7 |
respiratory airway | 1.65e-15 | 7 |
tracheobronchial tree | 5.55e-08 | 15 |
lower respiratory tract | 5.55e-08 | 15 |