FFCP PHASE1:Hg19::chr20:47803444..47803453,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:47803444..47803453,- | |||
|description=CAGE_peak_at_chr20:47803444..47803453,- | |description=CAGE_peak_at_chr20:47803444..47803453,- | ||
|id=chr20:47803444..47803453,- | |id=chr20:47803444..47803453,- | ||
|ontology_enrichment_celltype=CL:0002274!5.09e-09!5;CL:0000457!5.09e-09!5;CL:0002191!5.09e-09!5;CL:0000097!5.09e-09!5;CL:0000831!5.09e-09!5;CL:0002028!5.09e-09!5 | |ontology_enrichment_celltype=CL:0002274!5.09e-09!5;CL:0000457!5.09e-09!5;CL:0002191!5.09e-09!5;CL:0000097!5.09e-09!5;CL:0000831!5.09e-09!5;CL:0002028!5.09e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.28e-27;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.22e-27,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.00e-30;11!UBERON:0009497;1.29e-25;13!UBERON:0001041;4.08e-11;30!UBERON:0003104;9.55e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.53e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.02e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.26e-14!15;UBERON:0000179!1.26e-14!15;UBERON:0000463!1.26e-14!15;UBERON:0007023!5.13e-10!115;UBERON:0005057!4.28e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.37e-33;19!UBERON:0006925;1.37e-33;19!UBERON:0002423;1.94e-25;25!UBERON:0000178;8.55e-22;15!UBERON:0000179;8.55e-22;15!UBERON:0000463;8.55e-22;15!UBERON:0002365;1.74e-19;31!UBERON:0002330;1.74e-19;31!UBERON:0002368;6.58e-17;33!UBERON:0000949;2.11e-12;43!UBERON:0002390;3.52e-10;32!UBERON:0005172;1.08e-07;52!UBERON:0005173;1.08e-07;52!UBERON:0002417;2.88e-07;58!UBERON:0000916;2.88e-07;58!UBERON:0002193;9.23e-07;42!UBERON:0002530;9.52e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.24e-33,19;UBERON:0006925,1.24e-33,19;UBERON:0008836,1.24e-33,19;UBERON:0008835,5.37e-29,22;UBERON:0003894,5.37e-29,22;UBERON:0009854,1.02e-27,23;UBERON:0007499,1.80e-25,25;UBERON:0009497,1.80e-25,25;UBERON:0000015,1.80e-25,25;UBERON:0002423,1.80e-25,25;UBERON:0006235,1.80e-25,25;UBERON:0004161,1.80e-25,25;UBERON:0009856,1.78e-24,26;UBERON:0000178,8.94e-22,15;UBERON:0000179,8.94e-22,15;UBERON:0000463,8.94e-22,15;UBERON:0002365,1.85e-20,31;UBERON:0002330,1.85e-20,31;UBERON:0002368,4.55e-18,35;UBERON:0000949,6.06e-14,45;UBERON:0003929,1.57e-11,54;UBERON:0005172,1.57e-11,54;UBERON:0005173,1.57e-11,54;UBERON:0002530,1.65e-10,59;UBERON:0002417,2.53e-10,60;UBERON:0000916,2.53e-10,60;UBERON:0005911,2.14e-07,82;UBERON:0001041,6.16e-07,87 | |||
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| ||
|short_description=p@chr20:47803444..47803453,- | |short_description=p@chr20:47803444..47803453,- | ||
}} | }} |
Latest revision as of 14:57, 28 July 2015
Short description: | p@chr20:47803444..47803453, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:47803444..47803453, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.22e-27 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.24e-33 | 19 |
digestive gland | 1.24e-33 | 19 |
liver bud | 1.24e-33 | 19 |
hepatic diverticulum | 5.37e-29 | 22 |
liver primordium | 5.37e-29 | 22 |
digestive tract diverticulum | 1.02e-27 | 23 |
epithelial sac | 1.80e-25 | 25 |
epithelium of foregut-midgut junction | 1.80e-25 | 25 |
anatomical boundary | 1.80e-25 | 25 |
hepatobiliary system | 1.80e-25 | 25 |
foregut-midgut junction | 1.80e-25 | 25 |
septum transversum | 1.80e-25 | 25 |
sac | 1.78e-24 | 26 |
blood | 8.94e-22 | 15 |
haemolymphatic fluid | 8.94e-22 | 15 |
organism substance | 8.94e-22 | 15 |
exocrine gland | 1.85e-20 | 31 |
exocrine system | 1.85e-20 | 31 |
endocrine gland | 4.55e-18 | 35 |
endocrine system | 6.06e-14 | 45 |
gut epithelium | 1.57e-11 | 54 |
abdomen element | 1.57e-11 | 54 |
abdominal segment element | 1.57e-11 | 54 |
gland | 1.65e-10 | 59 |
abdominal segment of trunk | 2.53e-10 | 60 |
abdomen | 2.53e-10 | 60 |
endo-epithelium | 2.14e-07 | 82 |
foregut | 6.16e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.02e-08 | 2 |