FFCP PHASE1:Hg19::chr20:61298260..61298263,-: Difference between revisions
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|id=chr20:61298260..61298263,-
|short_description=p3@ENST00000411824
|description=CAGE_peak_3_at_ENST00000411824_5end
|association_with_transcript=-184bp_to_ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-184bp_to_ENST00000411824_5end | |||
|cluster_id=chr20:61298260..61298263,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_3_at_ENST00000411824_5end | |||
|id=chr20:61298260..61298263,- | |||
|ontology_enrichment_celltype=CL:0002178!7.26e-19!3;CL:0002566!3.15e-14!1;CL:0000181!1.91e-10!12;CL:0000417!1.91e-10!12;CL:0000668!1.91e-10!12;CL:0000414!1.91e-10!12;CL:0000412!1.91e-10!12;CL:0000182!1.91e-10!12;CL:0001014!4.09e-08!2;CL:0001016!4.09e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.39e-66;3!CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.39e-66,3;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!4.73e-28!2;DOID:3111!1.23e-14!1;DOID:3603!1.23e-14!1;DOID:299!7.60e-09!25;DOID:305!3.12e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.55e-98;2!DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.55e-98,2;DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0009497!3.22e-13!25;UBERON:0000015!3.22e-13!25;UBERON:0002423!3.22e-13!25;UBERON:0006235!3.22e-13!25;UBERON:0004161!3.22e-13!25;UBERON:0005409!5.13e-13!35;UBERON:0008835!7.74e-10!22;UBERON:0003894!7.74e-10!22;UBERON:0009854!2.02e-09!23;UBERON:0004921!4.81e-09!129;UBERON:0004185!4.81e-09!129;UBERON:0001007!5.24e-09!155;UBERON:0001555!5.24e-09!155;UBERON:0007026!5.24e-09!155;UBERON:0007499!1.10e-08!25;UBERON:0002294!1.27e-08!7;UBERON:0001173!1.27e-08!7;UBERON:0004912!1.27e-08!7;UBERON:0009856!2.33e-08!26;UBERON:0004119!3.75e-08!169;UBERON:0000925!3.75e-08!169;UBERON:0006595!3.75e-08!169;UBERON:0000160!7.69e-08!27;UBERON:0000945!1.19e-07!8;UBERON:0010039!1.19e-07!8;UBERON:0001155!7.64e-07!9;UBERON:0002107!8.63e-07!19;UBERON:0006925!8.63e-07!19;UBERON:0008836!8.63e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.48e-40;5!UBERON:0010039;1.48e-40;5!UBERON:0001041;1.43e-15;14!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p3@ENST00000411824 | |||
}} | }} |
Latest revision as of 16:12, 28 July 2015
Short description: | p3@ENST00000411824 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000411824_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | -184bp_to_ENST00000411824_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.39e-66 | 3 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.55e-98 | 2 |
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |