FFCP PHASE1:Hg19::chr20:62173440..62173455,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:62173440..62173455,- | |||
|description=CAGE_peak_at_chr20:62173440..62173455,- | |description=CAGE_peak_at_chr20:62173440..62173455,- | ||
|id=chr20:62173440..62173455,- | |id=chr20:62173440..62173455,- | ||
|ontology_enrichment_celltype=CL:0002150!2.08e-09!3;CL:0000861!2.08e-09!3;CL:1000415!3.98e-07!2 | |ontology_enrichment_celltype=CL:0002150!2.08e-09!3;CL:0000861!2.08e-09!3;CL:1000415!3.98e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;9.07e-10;2!CL:1000415;1.07e-09;2!CL:0002178;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,8.69e-10,2;CL:1000415,1.12e-09,2;CL:0002178,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.66e-18;1 | |||
|ontology_enrichment_disease=DOID:305!6.03e-11!106;DOID:3493!7.88e-08!2;DOID:0050687!2.16e-07!143 | |ontology_enrichment_disease=DOID:305!6.03e-11!106;DOID:3493!7.88e-08!2;DOID:0050687!2.16e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.08e-33;2!DOID:3111;1.22e-17;1!DOID:3603;1.22e-17;1!DOID:299;1.61e-16;25!DOID:3119;3.13e-11;14!DOID:4929;1.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.64e-33,2;DOID:3111,8.72e-18,1;DOID:3603,8.72e-18,1;DOID:299,1.67e-16,25;DOID:305,7.96e-15,106;DOID:3119,3.13e-11,14;DOID:0050687,8.90e-11,143;DOID:4929,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!4.34e-11!7;UBERON:0001173!4.34e-11!7;UBERON:0004912!4.34e-11!7;UBERON:0002110!1.04e-09!3;UBERON:0006242!1.04e-09!3;UBERON:0004119!2.38e-09!169;UBERON:0000925!2.38e-09!169;UBERON:0006595!2.38e-09!169;UBERON:0001007!3.94e-09!155;UBERON:0001555!3.94e-09!155;UBERON:0007026!3.94e-09!155;UBERON:0000077!2.48e-08!130;UBERON:0001737!3.59e-08!9;UBERON:0004921!1.34e-07!129;UBERON:0004185!1.34e-07!129;UBERON:0001829!1.94e-07!2;UBERON:0003127!3.01e-07!2;UBERON:0000341!3.74e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.22e-17;1!UBERON:0003703;1.22e-17;1!UBERON:0001174;1.22e-17;1!UBERON:0004914;1.22e-17;1!UBERON:0000945;3.97e-14;5!UBERON:0010039;3.97e-14;5!UBERON:0005409;8.59e-12;22!UBERON:0002294;2.09e-10;7!UBERON:0001173;2.09e-10;7!UBERON:0006955;9.07e-10;2!UBERON:0004801;9.07e-10;2!UBERON:0004921;4.94e-08;33!UBERON:0002110;7.08e-07;3!UBERON:0002114;9.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.22e-17,1;UBERON:0003703,1.22e-17,1;UBERON:0001174,1.22e-17,1;UBERON:0004914,1.22e-17,1;UBERON:0005409,1.77e-10,25;UBERON:0006955,8.69e-10,2;UBERON:0004801,8.69e-10,2;UBERON:0000945,3.41e-09,8;UBERON:0010039,3.41e-09,8;UBERON:0002294,2.75e-08,9;UBERON:0001173,2.75e-08,9;UBERON:0004912,2.75e-08,9;UBERON:0002110,7.28e-07,3;UBERON:0006242,7.28e-07,3;UBERON:0002114,9.64e-07,2 | |||
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| ||
|short_description=p@chr20:62173440..62173455,- | |short_description=p@chr20:62173440..62173455,- | ||
}} | }} |
Latest revision as of 16:21, 28 July 2015
Short description: | p@chr20:62173440..62173455, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:62173440..62173455, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 8.69e-10 | 2 |
epithelial cell of gall bladder | 1.12e-09 | 2 |
epithelial cell of stomach | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.22e-17 | 1 |
extrahepatic bile duct | 1.22e-17 | 1 |
common bile duct | 1.22e-17 | 1 |
duodenal papilla | 1.22e-17 | 1 |
gastrointestinal system | 1.77e-10 | 25 |
uterine epithelium | 8.69e-10 | 2 |
cervix epithelium | 8.69e-10 | 2 |
stomach | 3.41e-09 | 8 |
food storage organ | 3.41e-09 | 8 |
biliary system | 2.75e-08 | 9 |
biliary tree | 2.75e-08 | 9 |
biliary bud | 2.75e-08 | 9 |
gallbladder | 7.28e-07 | 3 |
gall bladder primordium | 7.28e-07 | 3 |
duodenum | 9.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.64e-33 | 2 |
cystadenocarcinoma | 8.72e-18 | 1 |
mucinous cystadenocarcinoma | 8.72e-18 | 1 |
adenocarcinoma | 1.67e-16 | 25 |
carcinoma | 7.96e-15 | 106 |
gastrointestinal system cancer | 3.13e-11 | 14 |
cell type cancer | 8.90e-11 | 143 |
tubular adenocarcinoma | 1.71e-09 | 2 |