FFCP PHASE1:Hg19::chr21:39670082..39670093,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:39670082..39670093,+ | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_at_chr21:39670082..39670093,+ | |description=CAGE_peak_at_chr21:39670082..39670093,+ | ||
|id=chr21:39670082..39670093,+ | |id=chr21:39670082..39670093,+ | ||
|ontology_enrichment_celltype=CL:0000349!4.11e-13!3;CL:0002577!4.11e-13!3;CL:0001014!1.25e-09!2;CL:0001016!1.25e-09!2;CL:0002536!1.67e-09!2;CL:0002540!7.66e-07!6 | |ontology_enrichment_celltype=CL:0000349!4.11e-13!3;CL:0002577!4.11e-13!3;CL:0001014!1.25e-09!2;CL:0001016!1.25e-09!2;CL:0002536!1.67e-09!2;CL:0002540!7.66e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0001014;7.05e-34;2!CL:0001016;7.05e-34;2!CL:0002577;3.27e-23;3!CL:0000349;4.91e-15;19!CL:0002537;1.40e-14;5!CL:0000453;1.83e-14;5!CL:0000840;2.74e-12;5!CL:0000990;1.21e-08;8!CL:0000451;2.63e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.05e-34,2;CL:0001016,7.05e-34,2;CL:0002577,3.27e-23,3;CL:0000349,4.91e-15,19;CL:0002537,1.40e-14,5;CL:0000453,1.83e-14,5;CL:0000840,2.74e-12,5;CL:0001029,2.74e-12,5;CL:0000990,1.21e-08,8;CL:0000451,2.63e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.89e-22!14;UBERON:0000158!2.89e-22!14;UBERON:0003124!3.53e-14!7;UBERON:0000478!2.89e-12!24;UBERON:0001737!9.08e-11!9;UBERON:0000305!5.98e-10!7;UBERON:0001987!6.11e-10!4;UBERON:0004340!6.11e-10!4;UBERON:0004871!1.05e-08!8;UBERON:0001557!9.27e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;8.69e-18;4!UBERON:0000478;3.75e-12;24!UBERON:0000305;8.16e-11;7!UBERON:0005631;5.73e-08;10!UBERON:0000158;5.73e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.89e-20,14;UBERON:0000158,5.89e-20,14;UBERON:0001987,8.69e-18,4;UBERON:0004340,8.69e-18,4;UBERON:0000478,3.75e-12,24;UBERON:0000305,8.16e-11,7;UBERON:0003124,8.99e-11,7;UBERON:0004871,1.24e-09,8 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.491467873003018,0,0.655324116390517,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.674156540800822,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,8.32177197552485,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,12.4725165949708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0.754703705257725,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.491467873003018,0,0.655324116390517,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.674156540800822,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,8.32177197552485,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,12.4725165949708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0.754703705257725,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr21:39670082..39670093,+ | |short_description=p@chr21:39670082..39670093,+ | ||
}} | }} |
Latest revision as of 17:52, 28 July 2015
Short description: | p@chr21:39670082..39670093, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:39670082..39670093, + |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.05e-34 | 2 |
immature CD1a-positive Langerhans cell | 7.05e-34 | 2 |
placental epithelial cell | 3.27e-23 | 3 |
extraembryonic cell | 4.91e-15 | 19 |
amnion mesenchymal stem cell | 1.40e-14 | 5 |
Langerhans cell | 1.83e-14 | 5 |
immature conventional dendritic cell | 2.74e-12 | 5 |
common dendritic progenitor | 2.74e-12 | 5 |
conventional dendritic cell | 1.21e-08 | 8 |
dendritic cell | 2.63e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.89e-20 | 14 |
membranous layer | 5.89e-20 | 14 |
placenta | 8.69e-18 | 4 |
allantois | 8.69e-18 | 4 |
extraembryonic structure | 3.75e-12 | 24 |
amnion | 8.16e-11 | 7 |
chorion | 8.99e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.24e-09 | 8 |