FFCP PHASE1:Hg19::chr21:43955104..43955124,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:43955104..43955124,- | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_at_chr21:43955104..43955124,- | |description=CAGE_peak_at_chr21:43955104..43955124,- | ||
|id=chr21:43955104..43955124,- | |id=chr21:43955104..43955124,- | ||
|ontology_enrichment_celltype=CL:0000945!2.97e-49!24;CL:0000826!2.97e-49!24;CL:0000542!4.18e-23!53;CL:0000051!4.18e-23!53;CL:0000236!2.61e-21!14;CL:0000838!1.07e-20!52;CL:0002087!1.00e-17!119;CL:0000738!1.07e-15!140;CL:0002031!2.90e-12!124;CL:0000037!9.74e-12!172;CL:0000566!9.74e-12!172;CL:0000785!7.23e-11!2;CL:0000955!7.23e-11!2;CL:0000818!7.23e-11!2;CL:0000954!7.23e-11!2;CL:0000816!7.23e-11!2;CL:0000988!8.68e-11!182;CL:0002032!3.60e-10!165;CL:0000837!3.60e-10!165;CL:0000817!1.63e-07!3;CL:0000842!4.34e-07!3 | |ontology_enrichment_celltype=CL:0000945!2.97e-49!24;CL:0000826!2.97e-49!24;CL:0000542!4.18e-23!53;CL:0000051!4.18e-23!53;CL:0000236!2.61e-21!14;CL:0000838!1.07e-20!52;CL:0002087!1.00e-17!119;CL:0000738!1.07e-15!140;CL:0002031!2.90e-12!124;CL:0000037!9.74e-12!172;CL:0000566!9.74e-12!172;CL:0000785!7.23e-11!2;CL:0000955!7.23e-11!2;CL:0000818!7.23e-11!2;CL:0000954!7.23e-11!2;CL:0000816!7.23e-11!2;CL:0000988!8.68e-11!182;CL:0002032!3.60e-10!165;CL:0000837!3.60e-10!165;CL:0000817!1.63e-07!3;CL:0000842!4.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.04e-89;24!CL:0000236;4.83e-29;13!CL:0000542;2.65e-25;53!CL:0000946;2.63e-16;1!CL:0000785;2.63e-16;1!CL:0000819;2.63e-16;1!CL:0000786;2.63e-16;1!CL:0002087;4.02e-11;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.04e-89,24;CL:0000826,1.04e-89,24;CL:0000542,2.06e-47,53;CL:0000051,2.06e-47,53;CL:0000838,5.24e-41,52;CL:0000236,1.86e-38,14;CL:0000785,1.02e-30,2;CL:0000955,1.02e-30,2;CL:0000818,1.02e-30,2;CL:0000954,1.02e-30,2;CL:0000816,1.02e-30,2;CL:0002087,3.64e-21,115;CL:0000817,7.42e-21,3;CL:0000738,9.17e-18,136;CL:0002031,4.36e-17,120;CL:0000946,2.63e-16,1;CL:0000786,2.63e-16,1;CL:0000980,2.63e-16,1;CL:0000819,3.07e-16,1;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177 | |||
|ontology_enrichment_development_v019=CL:0000954;8.71e-31;2!CL:0000051;2.65e-25;53 | |||
|ontology_enrichment_disease=DOID:0060058!6.45e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:12603;5.53e-17;1!DOID:0060073;2.63e-16;1!DOID:8675;2.63e-16;1!DOID:0060058;2.44e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.53e-17,1;DOID:0060073,3.07e-16,1;DOID:8675,3.07e-16,1;DOID:0060058,2.55e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.62e-14!3;UBERON:0004854!1.62e-14!3;UBERON:0009034!1.62e-14!3;UBERON:0002095!1.62e-14!3;UBERON:0004782!1.62e-14!3;UBERON:0003281!1.62e-14!3;UBERON:0009664!1.62e-14!3;UBERON:0002296!1.62e-14!3;UBERON:0005602!1.62e-14!3;UBERON:0001179!1.62e-14!3;UBERON:0006293!1.62e-14!3 | |ontology_enrichment_uberon=UBERON:0002106!1.62e-14!3;UBERON:0004854!1.62e-14!3;UBERON:0009034!1.62e-14!3;UBERON:0002095!1.62e-14!3;UBERON:0004782!1.62e-14!3;UBERON:0003281!1.62e-14!3;UBERON:0009664!1.62e-14!3;UBERON:0002296!1.62e-14!3;UBERON:0005602!1.62e-14!3;UBERON:0001179!1.62e-14!3;UBERON:0006293!1.62e-14!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr21:43955104..43955124,- | |short_description=p@chr21:43955104..43955124,- | ||
}} | }} |
Latest revision as of 18:11, 28 July 2015
Short description: | p@chr21:43955104..43955124, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:43955104..43955124, - |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.04e-89 | 24 |
pro-B cell | 1.04e-89 | 24 |
lymphocyte | 2.06e-47 | 53 |
common lymphoid progenitor | 2.06e-47 | 53 |
lymphoid lineage restricted progenitor cell | 5.24e-41 | 52 |
B cell | 1.86e-38 | 14 |
mature B cell | 1.02e-30 | 2 |
pre-B-II cell | 1.02e-30 | 2 |
transitional stage B cell | 1.02e-30 | 2 |
small pre-B-II cell | 1.02e-30 | 2 |
immature B cell | 1.02e-30 | 2 |
nongranular leukocyte | 3.64e-21 | 115 |
precursor B cell | 7.42e-21 | 3 |
leukocyte | 9.17e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 4.36e-17 | 120 |
antibody secreting cell | 2.63e-16 | 1 |
plasma cell | 2.63e-16 | 1 |
plasmablast | 2.63e-16 | 1 |
B-1 B cell | 3.07e-16 | 1 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.53e-17 | 1 |
lymphatic system cancer | 3.07e-16 | 1 |
lymphosarcoma | 3.07e-16 | 1 |
lymphoma | 2.55e-14 | 10 |