FFCP PHASE1:Hg19::chr22:33255345..33255482,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_CU676956_5end | |association_with_transcript=0bp_to_CU676956_5end | ||
|cluster_id=chr22:33255345..33255482,- | |||
|coexpression_cluster_id=C1492 | |||
|description=CAGE_peak_1_at_CU676956_5end | |description=CAGE_peak_1_at_CU676956_5end | ||
|id=chr22:33255345..33255482,- | |id=chr22:33255345..33255482,- | ||
|ontology_enrichment_celltype=CL:0000055!4.55e-13!180;CL:0000057!6.66e-11!75;CL:0002334!7.05e-08!12 | |ontology_enrichment_celltype=CL:0000055!4.55e-13!180;CL:0000057!6.66e-11!75;CL:0002334!7.05e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.48e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.44e-11,76;CL:0002334,1.86e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.42e-11!57;UBERON:0000475!1.26e-10!365;UBERON:0000064!1.44e-08!219;UBERON:0000468!9.07e-08!659;UBERON:0003102!1.39e-07!95;UBERON:0005631!1.60e-07!14;UBERON:0000158!1.60e-07!14;UBERON:0001013!1.76e-07!14;UBERON:0002199!1.98e-07!45;UBERON:0002416!1.98e-07!45;UBERON:0000481!6.31e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.14e-08;14!UBERON:0005631;7.79e-07;10!UBERON:0000158;7.79e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,2.77e-11,66;UBERON:0005631,2.51e-09,14;UBERON:0000158,2.51e-09,14;UBERON:0002199,2.26e-08,46;UBERON:0002416,2.26e-08,46;UBERON:0001013,2.27e-08,14;UBERON:0002097,6.37e-07,41;UBERON:0003124,9.47e-07,7 | |||
|phase1_expression=7.08545679155171,4.92431204949261,5.07435854745496,19.0139266870948,14.7497161161005,15.7020934338066,5.06599756336621,3.15859936713415,0.522371256399677,1.47440361900905,0,7.20856528029568,5.53910654279752,0,0.662794751455832,3.36162573225888,1.20538905604795,0,1.95173119516203,0.246242116153576,0.408001382488506,0.626909442956176,1.14494394852423,0.821246550437305,1.75759695432724,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96373941714944,5.42158728576849,0,3.76600949298142,0,12.6525066278685,0.661743720148475,1.77383517970051,0.43917392846563,4.6497571801688,0,0,0.97364218096405,0.696518949197069,1.06366368415092,0,0,0,0,0,0,0,0,0,0,1.29208379584664,0.35576626268671,3.01248551488203,0,0,4.63717909341522,0,0.81014194788176,0.267899184852239,0,0.225222960966644,0,0,0,0,0,0.436094052142534,40.2547280873208,3.16576279161449,3.57504788195691,11.4734648299525,2.12801029319014,0,1.06748995729705,4.9333509683432,0.933633106199299,0.134710672069688,0.163461903113459,0.302714855289863,1.72852777344,3.74914290934075,4.37024107562449,0,2.24173020827702,0.352303495931295,0.161872944368132,0.421352420106746,1.02077085627447,0.982674538494144,1.65321249881225,2.37600571456411,4.20353779773547,0,0,0.505008341862199,0.125118519871964,0,1.31693286264251,2.45190236639216,1.95309476578576,0.567160915800105,8.79009214875424,4.27114777637135,6.78182083710598,25.2076520710898,4.94652140344507,9.01741890159702,6.88632368426882,15.6961988984378,3.80004320128675,7.06814567883521,3.03764665519588,5.4959659318396,7.81021103536552,3.52632343796741,2.7129694769678,0.57978255948989,0,0,0,0,0,0.414644220061482,1.00928340350251,0,7.8224766164908,9.64861407289328,6.90674606762403,3.25057549622385,1.44375896333917,1.0647612003586,0.505754070234305,0.241011029883482,0.992645754591546,0.871517776369625,0.474541238222193,0.808987848960987,0.98110732562673,0,1.4763109092493,7.01208869017229,0.4115740113314,0,0,0,1.77236972004421,0,0.245976877086227,0.686271241194102,0.548751427043128,0,0.402115889646523,0.370353780634118,10.1000574646201,1.03993478527958,0,0.231860809950154,1.40890433082986,1.29929802984966,1.85194205030644,1.71228737011138,0,0,0,0.468008530278475,0.297262324577456,0,0.16798212819886,0.850650583454319,3.85101647622248,2.03443756959773,0.383382679165211,0,0.704387472105808,0.829312462163088,1.15295962733569,0.37872730027914,0.63497894292169,3.4378958300245,0,5.13217338068116,6.68378702571603,11.1126931402249,0.857479297891735,2.46688385559794,1.74384027533312,4.62031200671985,10.8588241236533,3.57656445851882,10.143633030672,1.59562869950922,0,0.514414748524284,0,1.3321108950805,1.71573592389777,0,0.823240336780769,3.90883421152482,2.13235169245527,0.791951872933429,0.904318131178758,0.871533458600294,4.39881161201051,0,0,2.10833939483032,0.239624855491583,2.29723871668228,0,0,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.36807447515742,1.00034104211935,1.35632511849868,4.99130067673937,4.81758269752337,4.57337003598411,1.63997980989798,0.902838299183157,4.5481500811197,5.17365356462525,2.65690239414175,2.02806085395873,4.86548241021264,5.286631251494,5.14715135716284,0,0,0,5.15316871458641,3.32870879020994,9.97887967987945,5.45837177201309,10.2819522103002,7.57782254969299,3.84417447767103,16.8863392192012,12.0640440857706,16.325987308949,15.4209693802656,21.8400922135146,5.91315523299426,1.55776328755086,14.6425076859549,0.725156697549733,1.40354529212299,0.828728900423067,1.26295892981067,0.182091168006717,0.786746489756545,0,0.462092022626489,0,0,0.105551628892876,4.54933536283586,1.19065593693561,1.72732732881711,6.16909010761157,0,0,0.254876273045038,0,0,0.219259876645935,0,6.41125312790973,5.576248976895,6.50756789328606,4.43076350085206,0,0,0,1.30012049207304,0,1.83674364755032,1.84858340537573,0.307007349452259,1.24052915236078,0.214840489736547,0.145016693914229,1.02271952899321,1.4245125703478,0.330569830721956,1.92190067365106,0.510450849978337,0.910420027699949,3.253918845081,33.6849211108785,2.7881490806424,2.46426864140871,1.06461206063404,0,0.55597265731176,0,1.86079184679834,2.53103539774981,2.47819252100972,5.88564920016068,11.9822916649498,0,0.78494864019923,0.719489830333259,0.54907405947211,0.589062011728432,1.41527737101321,11.0957224821106,2.52755073743389,0,31.682753652067,21.1300293513511,0.9554993798559,1.1312434556297,1.13008116620243,4.41092274836899,3.3171948762061,3.94605796728386,4.6302042741335,8.52663177660623,1.62328301570163,1.54911749049875,0.845086807596724,0.717056761020258,3.242218353433,0.35667105148125,0.709522128141196,14.7775344708365,20.086988470554,1.89736586882858,5.94889024416471,0.0962221127255121,0.670302275535787,0,4.89547764039252,0.86101074534246,0,1.33029046061003,0.689170200620878,0,0,0,0,0,0,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Latest revision as of 20:28, 28 July 2015
Short description: | p1@CU676956 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU676956_5end |
Coexpression cluster: | C1492_chorionic_amniotic_Smooth_basal_spindle_placenta_mesenchymal |
Association with transcript: | 0bp_to_CU676956_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 1.44e-11 | 76 |
preadipocyte | 1.86e-09 | 12 |
Ontology term | p-value | n |
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organ component layer | 2.77e-11 | 66 |
extraembryonic membrane | 2.51e-09 | 14 |
membranous layer | 2.51e-09 | 14 |
integument | 2.26e-08 | 46 |
integumental system | 2.26e-08 | 46 |
adipose tissue | 2.27e-08 | 14 |
skin of body | 6.37e-07 | 41 |
chorion | 9.47e-07 | 7 |