FFCP PHASE1:Hg19::chr2:129503997..129504017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:129503997..129504017,- | |||
|description=CAGE_peak_at_chr2:129503997..129504017,- | |description=CAGE_peak_at_chr2:129503997..129504017,- | ||
|id=chr2:129503997..129504017,- | |id=chr2:129503997..129504017,- | ||
|ontology_enrichment_celltype=CL:0000128!1.74e-10!7;CL:0000126!1.74e-10!7;CL:0000127!1.74e-10!7;CL:0002453!1.74e-10!7;CL:0000064!2.26e-08!3;CL:0005012!2.26e-08!3;CL:0000067!2.26e-08!3;CL:0002304!2.26e-08!3;CL:0002541!2.80e-08!3;CL:0002586!1.09e-07!3;CL:0002076!1.57e-07!43;CL:0002603!4.79e-07!3;CL:0000243!9.22e-07!15;CL:0000125!9.22e-07!15;CL:0000030!9.22e-07!15;CL:0000339!9.22e-07!15 | |ontology_enrichment_celltype=CL:0000128!1.74e-10!7;CL:0000126!1.74e-10!7;CL:0000127!1.74e-10!7;CL:0002453!1.74e-10!7;CL:0000064!2.26e-08!3;CL:0005012!2.26e-08!3;CL:0000067!2.26e-08!3;CL:0002304!2.26e-08!3;CL:0002541!2.80e-08!3;CL:0002586!1.09e-07!3;CL:0002076!1.57e-07!43;CL:0002603!4.79e-07!3;CL:0000243!9.22e-07!15;CL:0000125!9.22e-07!15;CL:0000030!9.22e-07!15;CL:0000339!9.22e-07!15 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000064,3.17e-14,3;CL:0000067,3.17e-14,3;CL:0005012,3.17e-14,3;CL:0002304,3.17e-14,3;CL:0002557,1.31e-11,1;CL:0000342,3.63e-11,1;CL:0002565,3.63e-11,1;CL:0000306,1.09e-10,4;CL:0002222,1.09e-10,4;CL:0002224,1.09e-10,4;CL:0002076,3.79e-08,42;CL:0002368,2.15e-07,13 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr2:129503997..129504017,- | |short_description=p@chr2:129503997..129504017,- | ||
}} | }} |
Latest revision as of 00:15, 29 July 2015
Short description: | p@chr2:129503997..129504017, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:129503997..129504017, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.17e-14 | 3 |
ciliated epithelial cell | 3.17e-14 | 3 |
multi-ciliated epithelial cell | 3.17e-14 | 3 |
non-pigmented ciliary epithelial cell | 3.17e-14 | 3 |
fibroblast of pulmonary artery | 1.31e-11 | 1 |
pigment cell (sensu Vertebrata) | 3.63e-11 | 1 |
iris pigment epithelial cell | 3.63e-11 | 1 |
crystallin accumulating cell | 1.09e-10 | 4 |
vertebrate lens cell | 1.09e-10 | 4 |
lens epithelial cell | 1.09e-10 | 4 |
endo-epithelial cell | 3.79e-08 | 42 |
respiratory epithelial cell | 2.15e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 7.83e-23 | 4 |
pigment epithelium of eye | 3.28e-22 | 11 |
anterior segment of eyeball | 1.89e-17 | 14 |
vasculature of eye | 1.93e-15 | 6 |
uvea | 1.93e-15 | 6 |
vasculature of head | 1.93e-15 | 6 |
vasculature of organ | 1.42e-14 | 11 |
ciliary epithelium | 3.17e-14 | 3 |
ciliary body | 3.17e-14 | 3 |
camera-type eye | 3.37e-12 | 20 |
simple eye | 3.37e-12 | 20 |
immature eye | 3.37e-12 | 20 |
ocular region | 3.37e-12 | 20 |
eyeball of camera-type eye | 3.37e-12 | 20 |
optic cup | 3.37e-12 | 20 |
optic vesicle | 3.37e-12 | 20 |
eye primordium | 3.37e-12 | 20 |
eye | 1.30e-11 | 21 |
visual system | 1.30e-11 | 21 |
iris epithelium | 3.63e-11 | 1 |
iris | 3.63e-11 | 1 |
face | 4.42e-11 | 22 |
cuboidal epithelium | 1.09e-10 | 4 |
transparent eye structure | 1.09e-10 | 4 |
simple cuboidal epithelium | 1.09e-10 | 4 |
cranial placode | 1.09e-10 | 4 |
lens of camera-type eye | 1.09e-10 | 4 |
epithelium of lens | 1.09e-10 | 4 |
lens placode | 1.09e-10 | 4 |
lens vesicle | 1.09e-10 | 4 |
sense organ | 3.78e-10 | 24 |
sensory system | 3.78e-10 | 24 |
entire sense organ system | 3.78e-10 | 24 |
head | 5.15e-08 | 56 |
ectodermal placode | 7.91e-08 | 31 |
anterior region of body | 3.60e-07 | 62 |
craniocervical region | 3.60e-07 | 62 |
subdivision of head | 7.24e-07 | 49 |