FFCP PHASE1:Hg19::chr2:181201662..181201665,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:181201662..181201665,+ | |||
|description=CAGE_peak_at_chr2:181201662..181201665,+ | |description=CAGE_peak_at_chr2:181201662..181201665,+ | ||
|id=chr2:181201662..181201665,+ | |id=chr2:181201662..181201665,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.67e-10!42;CL:0000557!1.24e-09!71;CL:0000860!2.16e-09!45;CL:0000839!6.32e-09!70;CL:0000766!1.84e-08!76;CL:0002009!2.78e-08!65;CL:0002194!7.85e-08!63;CL:0000576!7.85e-08!63;CL:0000040!7.85e-08!63;CL:0000559!7.85e-08!63 | |ontology_enrichment_celltype=CL:0002057!1.67e-10!42;CL:0000557!1.24e-09!71;CL:0000860!2.16e-09!45;CL:0000839!6.32e-09!70;CL:0000766!1.84e-08!76;CL:0002009!2.78e-08!65;CL:0002194!7.85e-08!63;CL:0000576!7.85e-08!63;CL:0000040!7.85e-08!63;CL:0000559!7.85e-08!63 | ||
|ontology_enrichment_celltype_v019=CL:0000228;5.52e-17;1!CL:0002372;5.52e-17;1!CL:0000342;1.53e-16;1!CL:0002565;1.53e-16;1!CL:0000197;4.15e-11;6!CL:0000098;4.15e-11;6!CL:0002167;4.15e-11;6!CL:0002363;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,4.72e-17,1;CL:0002372,4.72e-17,1;CL:0000342,1.21e-16,1;CL:0002565,1.21e-16,1;CL:0000197,2.91e-11,6;CL:0000098,2.91e-11,6;CL:0002167,2.91e-11,6;CL:0002363,8.09e-09,2;CL:0000008,8.09e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.17e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!1.82e-08!101;UBERON:0001434!1.82e-08!101;UBERON:0002371!2.13e-08!80;UBERON:0002204!5.74e-08!167;UBERON:0001474!7.55e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;1.53e-16;1!UBERON:0001769;1.53e-16;1!UBERON:0001801;1.73e-10;14!UBERON:0003566;6.17e-09;2!UBERON:0001777;6.17e-09;2!UBERON:0000019;7.11e-08;19!UBERON:0000047;7.11e-08;19!UBERON:0004088;7.11e-08;19!UBERON:0010230;7.11e-08;19!UBERON:0000970;1.66e-07;20!UBERON:0002104;3.57e-07;21!UBERON:0001456;3.57e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,1.21e-16,1;UBERON:0001769,1.21e-16,1;UBERON:0001801,1.84e-10,14;UBERON:0003566,8.09e-09,2;UBERON:0001777,8.09e-09,2;UBERON:0000019,1.73e-07,20;UBERON:0000047,1.73e-07,20;UBERON:0010312,1.73e-07,20;UBERON:0004088,1.73e-07,20;UBERON:0010230,1.73e-07,20;UBERON:0003072,1.73e-07,20;UBERON:0004128,1.73e-07,20;UBERON:0003071,1.73e-07,20;UBERON:0000970,3.72e-07,21;UBERON:0002104,3.72e-07,21;UBERON:0001456,7.47e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.755751887377619,0,0.232429036905685,0,0.929119112685311,0.863077176966451,0.512321413058201,0.236482229888585,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0,0.290209238628584,1.13477044938228,0.622822248995575,0.502497330513487,1.0429658368404,0.217188844705117,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.794455084879313,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0.300091096084402,0,0.515281080091258,0.18611685633159,1.18143432568886,0,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,1.03993478527958,0,2.78232971940184,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0,0.528290604079356,0.621984346622316,0,0.88369703398466,0,0,0,0,0.411309970813294,0.300343057843917,0.571652865261156,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,2.85273810081437,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,1.45579603071565,0.892144943985809,1.89242898040722,0.35142424497814,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,1.53461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.581051892299796,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.491245205065606,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0.883164973845552,0,0.253397002022874,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0.33639558774184,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.755751887377619,0,0.232429036905685,0,0.929119112685311,0.863077176966451,0.512321413058201,0.236482229888585,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0,0.290209238628584,1.13477044938228,0.622822248995575,0.502497330513487,1.0429658368404,0.217188844705117,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.794455084879313,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0.300091096084402,0,0.515281080091258,0.18611685633159,1.18143432568886,0,0.504867548488229,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,1.03993478527958,0,2.78232971940184,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0,0.528290604079356,0.621984346622316,0,0.88369703398466,0,0,0,0,0.411309970813294,0.300343057843917,0.571652865261156,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,2.85273810081437,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,1.45579603071565,0.892144943985809,1.89242898040722,0.35142424497814,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,1.53461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.581051892299796,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.491245205065606,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0.883164973845552,0,0.253397002022874,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0.33639558774184,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr2:181201662..181201665,+ | |short_description=p@chr2:181201662..181201665,+ | ||
}} | }} |
Latest revision as of 03:55, 29 July 2015
Short description: | p@chr2:181201662..181201665, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:181201662..181201665, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 4.72e-17 | 1 |
myotube | 4.72e-17 | 1 |
pigment cell (sensu Vertebrata) | 1.21e-16 | 1 |
iris pigment epithelial cell | 1.21e-16 | 1 |
receptor cell | 2.91e-11 | 6 |
sensory epithelial cell | 2.91e-11 | 6 |
olfactory epithelial cell | 2.91e-11 | 6 |
keratocyte | 8.09e-09 | 2 |
migratory cranial neural crest cell | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 1.21e-16 | 1 |
iris | 1.21e-16 | 1 |
anterior segment of eyeball | 1.84e-10 | 14 |
head connective tissue | 8.09e-09 | 2 |
substantia propria of cornea | 8.09e-09 | 2 |
camera-type eye | 1.73e-07 | 20 |
simple eye | 1.73e-07 | 20 |
immature eye | 1.73e-07 | 20 |
ocular region | 1.73e-07 | 20 |
eyeball of camera-type eye | 1.73e-07 | 20 |
optic cup | 1.73e-07 | 20 |
optic vesicle | 1.73e-07 | 20 |
eye primordium | 1.73e-07 | 20 |
eye | 3.72e-07 | 21 |
visual system | 3.72e-07 | 21 |
face | 7.47e-07 | 22 |