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FFCP PHASE1:Hg19::chr2:238671840..238671853,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr2:238671840..238671853,+
|coexpression_cluster_id=C829
|coexpression_cluster_id=C829
|description=CAGE_peak_at_chr2:238671840..238671853,+
|description=CAGE_peak_at_chr2:238671840..238671853,+
|id=chr2:238671840..238671853,+
|id=chr2:238671840..238671853,+
|ontology_enrichment_celltype=CL:0000860!1.92e-30!45;CL:0002057!6.09e-30!42;CL:0000766!2.25e-29!76;CL:0000839!2.77e-29!70;CL:0000557!7.34e-29!71;CL:0002194!1.88e-26!63;CL:0000576!1.88e-26!63;CL:0000040!1.88e-26!63;CL:0000559!1.88e-26!63;CL:0002009!2.16e-26!65;CL:0002031!1.76e-23!124;CL:0000738!1.62e-22!140;CL:0000763!7.30e-21!112;CL:0000049!7.30e-21!112;CL:0002087!8.21e-20!119;CL:0002032!3.68e-19!165;CL:0000837!3.68e-19!165;CL:0000037!1.11e-17!172;CL:0000566!1.11e-17!172;CL:0000988!1.80e-15!182
|ontology_enrichment_celltype=CL:0000860!1.92e-30!45;CL:0002057!6.09e-30!42;CL:0000766!2.25e-29!76;CL:0000839!2.77e-29!70;CL:0000557!7.34e-29!71;CL:0002194!1.88e-26!63;CL:0000576!1.88e-26!63;CL:0000040!1.88e-26!63;CL:0000559!1.88e-26!63;CL:0002009!2.16e-26!65;CL:0002031!1.76e-23!124;CL:0000738!1.62e-22!140;CL:0000763!7.30e-21!112;CL:0000049!7.30e-21!112;CL:0002087!8.21e-20!119;CL:0002032!3.68e-19!165;CL:0000837!3.68e-19!165;CL:0000037!1.11e-17!172;CL:0000566!1.11e-17!172;CL:0000988!1.80e-15!182
|ontology_enrichment_celltype_v019=CL:0000860;2.35e-96;33!CL:0002057;2.35e-96;33!CL:0000473;1.65e-81;39!CL:0000234;1.65e-81;39!CL:0000576;1.94e-49;48!CL:0000766;2.15e-32;69!CL:0000763;8.77e-17;100!CL:0002087;2.45e-11;104!CL:0000738;4.67e-10;136!CL:0000235;2.73e-08;6
|ontology_enrichment_celltype_v019_2=CL:0000473,5.77e-92,48;CL:0000234,5.77e-92,48;CL:0000860,2.66e-85,42;CL:0002057,2.66e-85,42;CL:0002194,2.43e-72,59;CL:0000576,2.43e-72,59;CL:0000040,2.43e-72,59;CL:0000559,2.43e-72,59;CL:0002009,8.29e-70,61;CL:0000766,4.66e-67,72;CL:0000839,3.89e-64,66;CL:0000557,4.22e-63,67;CL:0000763,8.80e-43,108;CL:0000049,8.80e-43,108;CL:0002087,6.34e-37,115;CL:0002031,3.91e-35,120;CL:0000738,5.37e-35,136;CL:0002032,1.43e-28,161;CL:0000837,1.43e-28,161;CL:0000037,4.10e-27,168;CL:0000988,2.10e-25,177;CL:0000134,3.65e-11,354;CL:0002320,8.22e-11,361;CL:0000219,1.43e-09,386;CL:0000034,4.03e-09,441;CL:0000048,7.69e-09,427;CL:0000723,1.28e-08,433;CL:0000235,2.95e-08,6
|ontology_enrichment_development_v019=CL:0002057;4.22e-61;42!CL:0000049;8.87e-14;108
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002371!7.70e-24!80;UBERON:0001474!3.10e-21!86;UBERON:0002390!7.58e-19!102;UBERON:0003061!7.58e-19!102;UBERON:0004765!2.92e-17!101;UBERON:0001434!2.92e-17!101;UBERON:0002193!1.41e-15!112;UBERON:0002405!5.99e-15!115;UBERON:0002204!5.10e-08!167
|ontology_enrichment_uberon=UBERON:0002371!7.70e-24!80;UBERON:0001474!3.10e-21!86;UBERON:0002390!7.58e-19!102;UBERON:0003061!7.58e-19!102;UBERON:0004765!2.92e-17!101;UBERON:0001434!2.92e-17!101;UBERON:0002193!1.41e-15!112;UBERON:0002405!5.99e-15!115;UBERON:0002204!5.10e-08!167
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.33e-55,76;UBERON:0001474,1.42e-50,82;UBERON:0004765,1.41e-45,90;UBERON:0002405,6.35e-44,93;UBERON:0002390,2.18e-41,98;UBERON:0003061,2.18e-41,98;UBERON:0001434,1.91e-40,100;UBERON:0002193,5.14e-37,108;UBERON:0002204,1.52e-23,167;UBERON:0003081,3.16e-18,203;UBERON:0000926,2.47e-11,315;UBERON:0004120,2.47e-11,315;UBERON:0006603,2.47e-11,315;UBERON:0002384,2.49e-10,371
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|short_description=p@chr2:238671840..238671853,+
|short_description=p@chr2:238671840..238671853,+
}}
}}

Latest revision as of 08:16, 29 July 2015

Short description:p@chr2:238671840..238671853, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr2:238671840..238671853, +
Coexpression cluster:C829_Neutrophils_CD14_Monocytederived_Prostate_acute_CD4_Natural
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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