FFCP PHASE1:Hg19::chr2:239208697..239208710,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:239208697..239208710,- | |||
|description=CAGE_peak_at_chr2:239208697..239208710,- | |||
|id=chr2:239208697..239208710,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.27e-25;2!UBERON:0008801;1.04e-13;1!UBERON:0006242;1.04e-13;1!UBERON:0005754;1.04e-13;1!UBERON:0009497;3.00e-09;13!UBERON:0006595;8.24e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;1.70e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.99e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.97e-22!115;UBERON:0006947!7.38e-15!3;UBERON:0004054!7.38e-15!3;UBERON:0004921!5.22e-14!129;UBERON:0004185!5.22e-14!129;UBERON:0001007!5.80e-12!155;UBERON:0001555!5.80e-12!155;UBERON:0007026!5.80e-12!155;UBERON:0004119!1.46e-11!169;UBERON:0000925!1.46e-11!169;UBERON:0006595!1.46e-11!169;UBERON:0000077!2.87e-11!130;UBERON:0005904!2.95e-11!4;UBERON:0000466!9.01e-11!126;UBERON:0001041!1.75e-10!98;UBERON:0003135!1.89e-10!11;UBERON:0003127!2.92e-10!2;UBERON:0001829!4.01e-10!2;UBERON:0005177!4.64e-08!107;UBERON:0000464!1.90e-07!104;UBERON:0001044!1.92e-07!6;UBERON:0003293!1.92e-07!6;UBERON:0003294!1.92e-07!6;UBERON:0010047!1.92e-07!6;UBERON:0000167!1.92e-07!6;UBERON:0003101!5.57e-07!22;UBERON:0000079!5.57e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.11e-38;3!UBERON:0004054;6.11e-38;3!UBERON:0005904;1.18e-28;4!UBERON:0000058;2.30e-20;10!UBERON:0003135;2.18e-18;11!UBERON:0001000;3.73e-14;1!UBERON:0005352;3.73e-14;1!UBERON:0001831;1.04e-13;1!UBERON:0000998;1.04e-13;1!UBERON:0001301;1.04e-13;1!UBERON:0006868;1.04e-13;1!UBERON:0001567;1.04e-13;1!UBERON:0003101;2.50e-09;22!UBERON:0000079;2.50e-09;22!UBERON:0001044;3.41e-09;6!UBERON:0003293;3.41e-09;6!UBERON:0003294;3.41e-09;6!UBERON:0010047;3.41e-09;6!UBERON:0003408;3.41e-09;6!UBERON:0000167;3.41e-09;6!UBERON:0002294;3.97e-08;7!UBERON:0001173;3.97e-08;7!UBERON:0003127;1.02e-07;2!UBERON:0001829;1.70e-07;2!UBERON:0004089;1.70e-07;2!UBERON:0000473;4.15e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.54e-38,3;UBERON:0004054,6.54e-38,3;UBERON:0005904,1.24e-28,4;UBERON:0003135,1.91e-18,11;UBERON:0001000,3.08e-14,1;UBERON:0005352,3.08e-14,1;UBERON:0000998,1.10e-13,1;UBERON:0006868,1.10e-13,1;UBERON:0001301,1.25e-13,1;UBERON:0001831,1.61e-13,1;UBERON:0001567,1.61e-13,1;UBERON:0008801,1.61e-13,1;UBERON:0007023,7.17e-12,114;UBERON:0000058,7.44e-11,19;UBERON:0002553,2.11e-09,61;UBERON:0003101,2.34e-09,22;UBERON:0000079,2.34e-09,22;UBERON:0001044,3.86e-09,6;UBERON:0003293,3.86e-09,6;UBERON:0003294,3.86e-09,6;UBERON:0010047,3.86e-09,6;UBERON:0000167,3.86e-09,6;UBERON:0003127,1.05e-07,2;UBERON:0001829,2.12e-07,2;UBERON:0004089,2.12e-07,2;UBERON:0000473,3.78e-07,8 | |||
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| ||
|short_description=p@chr2:239208697..239208710,- | |||
}} | }} |
Latest revision as of 08:20, 29 July 2015
Short description: | p@chr2:239208697..239208710, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:239208697..239208710, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.54e-38 | 3 |
internal male genitalia | 6.54e-38 | 3 |
duct of male reproductive system | 1.24e-28 | 4 |
male reproductive organ | 1.91e-18 | 11 |
vas deferens | 3.08e-14 | 1 |
spermatic cord | 3.08e-14 | 1 |
seminal vesicle | 1.10e-13 | 1 |
seminal fluid secreting gland | 1.10e-13 | 1 |
epididymis | 1.25e-13 | 1 |
parotid gland | 1.61e-13 | 1 |
cheek | 1.61e-13 | 1 |
parotid gland primordium | 1.61e-13 | 1 |
adult organism | 7.17e-12 | 114 |
duct | 7.44e-11 | 19 |
anatomical cavity | 2.11e-09 | 61 |
male organism | 2.34e-09 | 22 |
male reproductive system | 2.34e-09 | 22 |
saliva-secreting gland | 3.86e-09 | 6 |
gland of oral region | 3.86e-09 | 6 |
gland of foregut | 3.86e-09 | 6 |
oral gland | 3.86e-09 | 6 |
oral cavity | 3.86e-09 | 6 |
open tracheal system trachea | 1.05e-07 | 2 |
major salivary gland | 2.12e-07 | 2 |
midface | 2.12e-07 | 2 |
testis | 3.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.99e-07 | 2 |