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FFCP PHASE1:Hg19::chr2:24149046..24149063,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:24149046..24149063,+|id=chr2:24149046..24149063,+|ontology_enrichment_celltype=CL:0000738!5.51e-65!140;CL:0000037!6.31e-64!172;CL:0000566!6.31e-64!172;CL:0000988!1.62e-61!182;CL:0002032!3.28e-59!165;CL:0000837!3.28e-59!165;CL:0002087!7.67e-54!119;CL:0002031!8.01e-54!124;CL:0000766!7.75e-36!76;CL:0000763!4.93e-35!112;CL:0000049!4.93e-35!112;CL:0000557!2.48e-33!71;CL:0002009!1.08e-30!65;CL:0000839!4.86e-30!70;CL:0002194!2.17e-29!63;CL:0000576!2.17e-29!63;CL:0000040!2.17e-29!63;CL:0000559!2.17e-29!63;CL:0002057!1.46e-28!42;CL:0000860!1.01e-25!45;CL:0000542!4.75e-21!53;CL:0000051!4.75e-21!53;CL:0000838!1.02e-20!52;CL:0000134!3.61e-19!358;CL:0002320!1.47e-17!365;CL:0000219!9.94e-15!390;CL:0000048!6.53e-14!430;CL:0000034!3.51e-13!444;CL:0000723!6.88e-13!436;CL:0000945!7.69e-13!24;CL:0000826!7.69e-13!24;CL:0000236!6.18e-09!14;CL:0000084!8.58e-08!25;CL:0000827!8.58e-08!25;CL:0002393!6.92e-07!9;CL:0002397!6.92e-07!9;CL:0000791!9.87e-07!18;CL:0000789!9.87e-07!18;CL:0002420!9.87e-07!18;CL:0002419!9.87e-07!18;CL:0000790!9.87e-07!18|ontology_enrichment_celltype_v019=CL:0000860;6.65e-40;33!CL:0002057;6.65e-40;33!CL:0000576;4.93e-37;48!CL:0000473;7.06e-33;39!CL:0000234;7.06e-33;39!CL:0000766;4.34e-29;69!CL:0002087;6.19e-27;104!CL:0000738;3.26e-22;136!CL:0000945;6.39e-22;24!CL:0000542;1.49e-19;53!CL:0000763;1.39e-18;100!CL:0000236;3.72e-15;13!CL:0000988;9.64e-15;177!CL:0000791;5.21e-12;18!CL:0000789;5.21e-12;18!CL:0002419;5.21e-12;18!CL:0000084;7.37e-10;25!CL:0000094;1.94e-09;8!CL:0002393;2.02e-09;6!CL:0002397;2.02e-09;6!CL:0000219;2.52e-09;193!CL:0000081;7.22e-08;11!CL:0000624;1.29e-07;6!CL:0000625;2.96e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,5.93e-107,136;CL:0000037,3.81e-103,168;CL:0000988,1.40e-97,177;CL:0002032,6.74e-96,161;CL:0000837,6.74e-96,161;CL:0002087,2.50e-94,115;CL:0002031,1.33e-91,120;CL:0000766,3.56e-63,72;CL:0000557,2.81e-58,67;CL:0002009,3.14e-56,61;CL:0000763,4.45e-56,108;CL:0000049,4.45e-56,108;CL:0000860,9.38e-55,42;CL:0002057,9.38e-55,42;CL:0000473,2.50e-54,48;CL:0000234,2.50e-54,48;CL:0002194,1.15e-53,59;CL:0000576,1.15e-53,59;CL:0000040,1.15e-53,59;CL:0000559,1.15e-53,59;CL:0000839,3.65e-52,66;CL:0000542,1.27e-33,53;CL:0000051,1.27e-33,53;CL:0000838,5.71e-33,52;CL:0000134,1.65e-30,354;CL:0002320,3.39e-29,361;CL:0000219,4.92e-26,386;CL:0000945,2.73e-22,24;CL:0000826,2.73e-22,24;CL:0000034,1.11e-21,441;CL:0000048,2.09e-21,427;CL:0000723,1.35e-20,433;CL:0000236,4.99e-16,14;CL:0000791,4.11e-12,18;CL:0000789,4.11e-12,18;CL:0002420,4.11e-12,18;CL:0002419,4.11e-12,18;CL:0000790,4.11e-12,18;CL:0002393,5.07e-12,9;CL:0002397,5.07e-12,9;CL:0000084,6.90e-10,25;CL:0000827,6.90e-10,25;CL:0000094,1.29e-09,8;CL:0000081,5.77e-08,11;CL:0000624,1.18e-07,6;CL:0000625,2.52e-07,11|ontology_enrichment_development_v019=CL:0002057;2.35e-39;42!CL:0000051;1.49e-19;53!CL:0000049;3.04e-16;108!CL:0000790;5.21e-12;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.57e-37!112;UBERON:0002390!6.74e-37!102;UBERON:0003061!6.74e-37!102;UBERON:0002371!6.99e-30!80;UBERON:0001474!4.51e-27!86;UBERON:0002405!2.97e-22!115;UBERON:0004765!7.20e-22!101;UBERON:0001434!7.20e-22!101;UBERON:0002384!2.32e-18!375;UBERON:0003081!2.09e-16!216;UBERON:0002204!2.84e-10!167|ontology_enrichment_uberon_v019=UBERON:0000178;1.69e-07;15!UBERON:0000179;1.69e-07;15!UBERON:0000463;1.69e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.76e-57,98;UBERON:0003061,6.76e-57,98;UBERON:0002371,1.51e-52,76;UBERON:0002193,6.85e-51,108;UBERON:0001474,3.86e-47,82;UBERON:0002405,8.29e-44,93;UBERON:0004765,4.58e-41,90;UBERON:0001434,7.21e-35,100;UBERON:0002384,4.34e-28,371;UBERON:0003081,3.40e-21,203;UBERON:0002204,1.18e-15,167;UBERON:0000178,1.98e-07,15;UBERON:0000179,1.98e-07,15;UBERON:0000463,1.98e-07,15;UBERON:0000926,8.89e-07,315;UBERON:0004120,8.89e-07,315;UBERON:0006603,8.89e-07,315|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,1.34088328328186,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0,1.60468152070698,1.9704141467987,1.8890587515283,13.7677496897116,6.90892916574983,7.58599004248772,0,0.30120591877825,0,5.03536803771961,1.13735385989937,4.9912074686924,13.2958898047651,17.046278034962,15.6247826915413,2.68698569087909,1.94336199611388,1.54545340580512,7.56070841653736,7.17964293008738,9.70336244751265,12.0863099190956,8.63452564845834,12.078548464909,10.9323109082417,11.7833925003386,10.4052181150977,14.8240642716746,9.03678557017357,5.41705946377367,13.5534484470675,10.0975275521403,6.29225756446237,19.5893691117378,8.98601275813062,10.2293940127847,11.2149442063483,9.17532825059507,6.39337125799041,22.34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{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr2:24149046..24149063,+
|description=CAGE_peak_at_chr2:24149046..24149063,+
|id=chr2:24149046..24149063,+
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|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|short_description=p@chr2:24149046..24149063,+
}}

Latest revision as of 08:28, 29 July 2015

Short description:p@chr2:24149046..24149063, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr2:24149046..24149063, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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