FFCP PHASE1:Hg19::chr2:27529068..27529081,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:27529068..27529081,+ | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr2:27529068..27529081,+ | |||
|id=chr2:27529068..27529081,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.55e-10!5;CL:0001024!5.69e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002535;4.66e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.66e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.91e-41;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;3.11e-21;2!DOID:4929;6.96e-21;2!DOID:4362;2.97e-09;5!DOID:299;2.35e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.11e-21,2;DOID:4929,6.96e-21,2;DOID:4362,2.97e-09,5;DOID:299,2.35e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0002294!9.31e-14!7;UBERON:0001173!9.31e-14!7;UBERON:0004912!9.31e-14!7;UBERON:0002046!8.01e-11!5;UBERON:0004117!8.01e-11!5;UBERON:0007689!8.01e-11!5;UBERON:0007123!8.01e-11!5;UBERON:0003091!8.01e-11!5;UBERON:0002110!6.18e-09!3;UBERON:0006242!6.18e-09!3;UBERON:0004913!2.66e-07!1;UBERON:0003703!2.66e-07!1;UBERON:0001174!2.66e-07!1;UBERON:0004914!2.66e-07!1;UBERON:0005418!3.36e-07!1;UBERON:0001389!3.36e-07!1;UBERON:0000026!3.36e-07!1;UBERON:0008784!3.36e-07!1;UBERON:0006058!3.36e-07!1;UBERON:0003663!3.36e-07!1;UBERON:0001383!3.36e-07!1;UBERON:0004256!3.36e-07!1;UBERON:0002529!3.36e-07!1;UBERON:0004708!3.36e-07!1;UBERON:0002101!3.36e-07!1;UBERON:0004709!3.36e-07!1;UBERON:0003661!3.36e-07!1;UBERON:0002471!3.36e-07!1;UBERON:0004357!3.36e-07!1;UBERON:0009872!3.36e-07!1;UBERON:0004347!3.36e-07!1;UBERON:0005420!3.36e-07!1;UBERON:0005732!3.36e-07!1;UBERON:0006057!3.36e-07!1;UBERON:0000978!3.36e-07!1;UBERON:0002103!3.36e-07!1;UBERON:0001665!3.36e-07!1;UBERON:0003823!3.36e-07!1;UBERON:0000154!3.36e-07!1;UBERON:0005733!3.36e-07!1;UBERON:0005730!3.36e-07!1;UBERON:0002394!8.75e-07!4;UBERON:0003928!8.75e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;3.30e-40;1!UBERON:0003703;3.30e-40;1!UBERON:0001174;3.30e-40;1!UBERON:0004914;3.30e-40;1!UBERON:0002294;1.61e-23;7!UBERON:0001173;1.61e-23;7!UBERON:0006955;4.66e-21;2!UBERON:0004801;4.66e-21;2!UBERON:0002110;1.40e-14;3!UBERON:0002114;2.09e-14;2!UBERON:0002394;3.79e-11;4!UBERON:0003928;3.79e-11;4!UBERON:0002108;3.49e-09;4!UBERON:0000002;6.34e-08;6!UBERON:0001560;6.34e-08;6!UBERON:0002423;2.43e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.30e-40,1;UBERON:0003703,3.30e-40,1;UBERON:0001174,3.30e-40,1;UBERON:0004914,3.30e-40,1;UBERON:0006955,4.66e-21,2;UBERON:0004801,4.66e-21,2;UBERON:0002294,1.48e-18,9;UBERON:0001173,1.48e-18,9;UBERON:0004912,1.48e-18,9;UBERON:0002110,1.40e-14,3;UBERON:0006242,1.40e-14,3;UBERON:0002114,2.09e-14,2;UBERON:0002108,3.49e-09,4;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6;UBERON:0002394,7.25e-08,6;UBERON:0003928,7.25e-08,6;UBERON:0009497,2.43e-07,25;UBERON:0000015,2.43e-07,25;UBERON:0002423,2.43e-07,25;UBERON:0006235,2.43e-07,25;UBERON:0004161,2.43e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77931235257603,0,0,0,5.2905877049398,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.782205530939212,0,6.40358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,2.95712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.7918265930496,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0.190941474834495,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:27529068..27529081,+ | |||
}} |
Latest revision as of 09:10, 29 July 2015
Short description: | p@chr2:27529068..27529081, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:27529068..27529081, + |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.66e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 3.30e-40 | 1 |
extrahepatic bile duct | 3.30e-40 | 1 |
common bile duct | 3.30e-40 | 1 |
duodenal papilla | 3.30e-40 | 1 |
uterine epithelium | 4.66e-21 | 2 |
cervix epithelium | 4.66e-21 | 2 |
biliary system | 1.48e-18 | 9 |
biliary tree | 1.48e-18 | 9 |
biliary bud | 1.48e-18 | 9 |
gallbladder | 1.40e-14 | 3 |
gall bladder primordium | 1.40e-14 | 3 |
duodenum | 2.09e-14 | 2 |
small intestine | 3.49e-09 | 4 |
uterine cervix | 6.34e-08 | 6 |
neck of organ | 6.34e-08 | 6 |
bile duct | 7.25e-08 | 6 |
digestive system duct | 7.25e-08 | 6 |
epithelium of foregut-midgut junction | 2.43e-07 | 25 |
anatomical boundary | 2.43e-07 | 25 |
hepatobiliary system | 2.43e-07 | 25 |
foregut-midgut junction | 2.43e-07 | 25 |
septum transversum | 2.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.11e-21 | 2 |
tubular adenocarcinoma | 6.96e-21 | 2 |
cervical cancer | 2.97e-09 | 5 |
adenocarcinoma | 2.35e-07 | 25 |