FFCP PHASE1:Hg19::chr2:28762016..28762055,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:28762016..28762055,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr2:28762016..28762055,- | |description=CAGE_peak_at_chr2:28762016..28762055,- | ||
|id=chr2:28762016..28762055,- | |id=chr2:28762016..28762055,- | ||
|ontology_enrichment_celltype=CL:0002178!5.80e-07!3 | |ontology_enrichment_celltype=CL:0002178!5.80e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.39e-66;3!CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.39e-66,3;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!7.98e-10!2 | |ontology_enrichment_disease=DOID:3493!7.98e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.55e-98;2!DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.55e-98,2;DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0001870!7.10e-34!2;UBERON:0002702!3.16e-18!1;UBERON:0002372!1.44e-17!1;UBERON:0001961!1.44e-17!1;UBERON:0001744!1.44e-17!1;UBERON:0001735!1.44e-17!1;UBERON:0002046!2.25e-14!5;UBERON:0004117!2.25e-14!5;UBERON:0007689!2.25e-14!5;UBERON:0007123!2.25e-14!5;UBERON:0003091!2.25e-14!5;UBERON:0000341!1.03e-09!2;UBERON:0001873!1.44e-09!2;UBERON:0010122!1.44e-09!2;UBERON:0001897!1.57e-09!2;UBERON:0009722!5.00e-07!11;UBERON:0007690!5.00e-07!11;UBERON:0005383!8.62e-07!3;UBERON:0005382!8.62e-07!3 | |ontology_enrichment_uberon=UBERON:0001870!7.10e-34!2;UBERON:0002702!3.16e-18!1;UBERON:0002372!1.44e-17!1;UBERON:0001961!1.44e-17!1;UBERON:0001744!1.44e-17!1;UBERON:0001735!1.44e-17!1;UBERON:0002046!2.25e-14!5;UBERON:0004117!2.25e-14!5;UBERON:0007689!2.25e-14!5;UBERON:0007123!2.25e-14!5;UBERON:0003091!2.25e-14!5;UBERON:0000341!1.03e-09!2;UBERON:0001873!1.44e-09!2;UBERON:0010122!1.44e-09!2;UBERON:0001897!1.57e-09!2;UBERON:0009722!5.00e-07!11;UBERON:0007690!5.00e-07!11;UBERON:0005383!8.62e-07!3;UBERON:0005382!8.62e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.48e-40;5!UBERON:0010039;1.48e-40;5!UBERON:0001041;1.43e-15;14!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p@chr2:28762016..28762055,- | |short_description=p@chr2:28762016..28762055,- | ||
}} | }} |
Latest revision as of 09:22, 29 July 2015
Short description: | p@chr2:28762016..28762055, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:28762016..28762055, - |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.39e-66 | 3 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.55e-98 | 2 |
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |